DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9663 and ABCG12

DIOPT Version :9

Sequence 1:NP_608760.2 Gene:CG9663 / 33541 FlyBaseID:FBgn0031516 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_175561.1 Gene:ABCG12 / 841575 AraportID:AT1G51500 Length:687 Species:Arabidopsis thaliana


Alignment Length:668 Identity:177/668 - (26%)
Similarity:322/668 - (48%) Gaps:103/668 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 TKDVLMGLTGYFKSGELSAVIGPSGAGKSTLLNILSGYTTYG--FTGDFRVNGNRRDLKAFKSNV 228
            |:.:|.||.|:.:.|.:.|::||||:||||||:.|:|.....  .||:..:||.:..|.  ...|
plant    41 TRRLLDGLNGHAEPGRIMAIMGPSGSGKSTLLDSLAGRLARNVIMTGNLLLNGKKARLD--YGLV 103

  Fly   229 AFIRQDTSLQAFLSVKEAMHFAANLKIGTHMTHSEKRERVKCILEAIGMYE-------NRHTRTG 286
            |::.|:..|...|:|:|.:.::|:|::.:.:|..|..:.|:..:..:|:.:       |.|:|  
plant   104 AYVTQEDILMGTLTVRETITYSAHLRLSSDLTKEEVNDIVEGTIIELGLQDCADRVIGNWHSR-- 166

  Fly   287 QLSGGQKKRLAIALELVNNPPVLILDEPTTGLDSFTSNQLINLLKKLAIE-GRTVICTIHQPSAL 350
            .:|||::||:::|||::..|.:|.|||||:||||.::..:|..|:.:|.: ||||:.:|||||:.
plant   167 GVSGGERKRVSVALEILTRPQILFLDEPTSGLDSASAFFVIQALRNIARDGGRTVVSSIHQPSSE 231

  Fly   351 TFAMFDHLYAIGEGKCIYAGGAQNLLPFLGALNLHCPESYNPADYLMEIATHDYDTAEDNQLEKL 415
            .||:||.|:.:..|:.:|.|.::..:.|.......||:..||:|:.:.....|:||.        
plant   232 VFALFDDLFLLSSGETVYFGESKFAVEFFAEAGFPCPKKRNPSDHFLRCINSDFDTV-------- 288

  Fly   416 VALMDNGRNEDYRQSKTARVAQLAAMKKVDQLMAAGLITPVTA-PVMSTSVPAHFMQGNTFKPLT 479
                               .|.|...:::.:       ||.|: |:|:.:.              
plant   289 -------------------TATLKGSQRIRE-------TPATSDPLMNLAT-------------- 313

  Fly   480 PINELSSRVWDSQTAGIGNAGSCCKPKKKNKSRPAIELDPSH-LCKRQNIYATPFYRQLSILLVR 543
              :|:.:|:.::...      |......|::.|....::..| :..|:...|| :::||..|..|
plant   314 --SEIKARLVENYRR------SVYAKSAKSRIRELASIEGHHGMEVRKGSEAT-WFKQLRTLTKR 369

  Fly   544 TFLLIWRDSSLTTMRFAIHLITGILIGTLYFGIGND-----AAQTLNIFRYLFYTIMFIMYCAFS 603
            :|:.:.||......|..|:::....:||:::.:|:.     |..:...|...|.|.|.|      
plant   370 SFVNMCRDIGYYWSRIVIYIVVSFCVGTIFYDVGHSYTSILARVSCGGFITGFMTFMSI------ 428

  Fly   604 GILVKFPLEFPIVSREHFNRWYSLRAYYVAITLADLPIQIICSALFIVPTYLMTQ-QP-LELWRF 666
            |....|..|..:..:|..:.:|.:..|.::..::..|..:..:.:....||.|.: :| :..|.|
plant   429 GGFPSFIEEMKVFYKERLSGYYGVSVYIISNYVSSFPFLVAIALITGSITYNMVKFRPGVSHWAF 493

  Fly   667 GMFFLIVFVTALVSQSIGLAVGAAL-SLKLGSILGPFFICPFLQFSGFFLMEKDAP-VFLRWMFD 729
              |.|.:|.:..|.:|:.:.|.:.: :..:|.|.|...|...:..||||.:..|.| ||  |.:.
plant   494 --FCLNIFFSVSVIESLMMVVASLVPNFLMGLITGAGIIGIIMMTSGFFRLLPDLPKVF--WRYP 554

  Fly   730 ISFLKY---SLEGATMAIF-GYDREPLACNELYCHLRHPQFILK--SLDMANGN-YTLALIFLFG 787
            |||:.|   :::||....| |.:.:|:...|  ..:...|.|.|  .:.:.:.. :.|:.|.|  
plant   555 ISFMSYGSWAIQGAYKNDFLGLEFDPMFAGE--PKMTGEQVINKIFGVQVTHSKWWDLSAIVL-- 615

  Fly   788 VLVFLRILAFYIMSFRLR 805
            :||..|||.|.::..:.|
plant   616 ILVCYRILFFIVLKLKER 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9663NP_608760.2 ABCG_EPDR 145..370 CDD:213180 78/213 (37%)
3a01204 149..808 CDD:273361 177/668 (26%)
ABC2_membrane 540..743 CDD:279410 54/214 (25%)
ABCG12NP_175561.1 3a01204 40..635 CDD:273361 177/668 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

Return to query results.
Submit another query.