DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9663 and Abca12

DIOPT Version :9

Sequence 1:NP_608760.2 Gene:CG9663 / 33541 FlyBaseID:FBgn0031516 Length:808 Species:Drosophila melanogaster
Sequence 2:XP_237242.6 Gene:Abca12 / 301482 RGDID:1304586 Length:2595 Species:Rattus norvegicus


Alignment Length:951 Identity:199/951 - (20%)
Similarity:329/951 - (34%) Gaps:311/951 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 ESRNTSSTATSGGSIFPHEQYKTIKKINIGFENIRYTTKFGVFQRETKDVLMGLTGYFKSGELSA 184
            :|.|.|:..||....||.......|.:.:|......|..:|     :|..:..|...|..|.:::
  Rat  1316 QSTNPSANKTSPDCAFPSNIEPEPKDLQVGVALHGVTKSYG-----SKTAVDNLNLNFYEGHITS 1375

  Fly   185 VIGPSGAGKSTLLNILSGYTTYGFT-GDFRVNGN--RRDLKAFKSNVAFIRQDTSLQAFLSVKEA 246
            ::||:||||:|.:::|:|  .:|.| |...|.|.  :.||...:.|:....|...|.::|:.||.
  Rat  1376 LLGPNGAGKTTTISMLTG--LFGATAGTIFVYGKDIKTDLNTVRKNMGVCMQHDVLFSYLTTKEH 1438

  Fly   247 MHFAANLKIGTHMTHSEKRERVKCILEAIGMYENRHTRTGQLSGGQKKRLAIALELVNNPPVLIL 311
            :....::|: .|.|..:..|.||..|:..|:|.:||.|.|.||||.|::|:|::.|:....|:||
  Rat  1439 LLLYGSIKV-PHWTKKQLHEEVKRTLKDTGLYSHRHKRVGTLSGGMKRKLSISIALIGGSRVVIL 1502

  Fly   312 DEPTTGLDSFTSNQLINLLKKLAIEGRTVICTIH------------------------------- 345
            |||:||:|..:...:.:::.|.. ..||:|.:.|                               
  Rat  1503 DEPSTGVDPCSRRSIWDVISKNK-TARTIILSTHHLDEAEVLSDRIAFLEQGGLRCCGSPFYLKE 1566

  Fly   346 --------------QPSALTFAMFD----------HL---YA---IGEGKCIY---------AGG 371
                          .|:..|.|:.|          ||   |.   || |:.:|         :|.
  Rat  1567 AFGDGYHLTLTKKKSPNLDTNAICDTVAVTAMIQSHLPEAYLKEDIG-GELVYVLPPFSTKVSGA 1630

  Fly   372 AQNLLPFL----GALNLHCPESYNPADYLMEIA----THDYDTAEDNQLEKLVA----------- 417
            ..:||..|    |.||:.|   |..:|..:|..    |.|.....:..||.|..           
  Rat  1631 YLSLLRALDKGMGKLNIGC---YGISDTTVEEVFLNLTKDSQKCGNMSLEHLTQRKVGNPSANGT 1692

  Fly   418 -----LMDNGRNEDYRQSKT-ARVAQL----AAMKKVDQLMA----------AGLITPVTAPVM- 461
                 |..:..|...|..|. .|..:|    ..:||:..::.          .|||..|..|:: 
  Rat  1693 STPDDLSVSSSNFTDRDDKVLTRSERLDGFGLLLKKIMAILIKRFHHTRRNWKGLIAQVVLPIVF 1757

  Fly   462 -------------STSVP----AHFMQGNT--------FKPLTPINELSSRVWDSQTAGIGN--- 498
                         |.|.|    :..:.||:        |.|.|  |.|.|.:|:  ..||.|   
  Rat  1758 VATAMGLGTLRDSSNSYPELLISPSIYGNSEQTAFYANFDPST--NALVSALWN--FPGIDNVCL 1818

  Fly   499 --AGSCCKPK----KKNKSRPAIE-------LDPSHLCKRQNIYATPFYRQLSILLV-------- 542
              :.|.|..|    |.|.|..||:       .|....|.:.| |:.|..|..|..::        
  Rat  1819 NTSDSQCLKKDNLGKWNTSGEAIDNFGVCSCSDNVQECPKFN-YSPPHRRTYSSQVIYNLTGKHM 1882

  Fly   543 ---------------------------------------RTFLLIWRD-----------SSLTTM 557
                                                   ||...:|.|           :||...
  Rat  1883 ENYLISTANHFVQKRYGGWSFGMKLTNDLRFDVTAVPVNRTLAKVWYDPEGYHSLPAYLNSLNNF 1947

  Fly   558 RFAIHLIT------GILI-GTLYFGIGNDAAQTLNIFRYLFYTIMFIM-YCAFSGILVKFPLEFP 614
            ...:::..      ||:: ...|.|:.:....|::....:...:..:| |...:...|.:     
  Rat  1948 LLRVNMSEYDAARHGIIMYSHPYPGVQDQEQATISSLIDILVALSILMGYSVTTASFVTY----- 2007

  Fly   615 IVSREHFNR---------------WYSLRAYYVAITLADLPIQIICSALFIVPTYL----MTQQP 660
             :.|||..:               |.:...|.:...|..:...|...|:|.:|.:.    :....
  Rat  2008 -IVREHQTKAKQLQHISGIGVTCYWVTNFIYDMVFYLVPVAFSIGVIAIFKLPAFYSGNNLGAVS 2071

  Fly   661 LELWRFG-MFFLIVFVTALVSQSIGLAVGAALSLKLGSILGPFF-ICPFLQFSGFFLMEKDAP-- 721
            |.|..|| ..|..:::.|.:....|:|....:.:.|      || |...:..|..:.:.|:.|  
  Rat  2072 LLLLLFGYATFSWMYLLAGLFHETGMAFITYVCVNL------FFGINSIVSLSVVYFLSKEKPND 2130

  Fly   722 ---------------VFLRWMFDISFLKYSLEGAT---MAIFG--YDREPLACNELYCHLRHPQF 766
                           :|.::.|....::.|.:.|.   :..:|  |..|....::|         
  Rat  2131 PTLELISETLKRIFLIFPQFCFGYGLIELSQQQAVLDFLKAYGVDYPSETFEMDKL--------- 2186

  Fly   767 ILKSLDMANGNYTLALIFLFGVLVFLRILAFYIMSFRLRLF 807
                     |...:||:....:...||:|....:..:||||
  Rat  2187 ---------GAMFVALVSQGTMFFLLRLLINEWLIKKLRLF 2218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9663NP_608760.2 ABCG_EPDR 145..370 CDD:213180 75/297 (25%)
3a01204 149..808 CDD:273361 191/922 (21%)
ABC2_membrane 540..743 CDD:279410 43/309 (14%)
Abca12XP_237242.6 ABC2_membrane_3 <1006..1267 CDD:289468
NosY <1108..1269 CDD:224196
ZnuC 1346..1570 CDD:224046 63/232 (27%)
ABC_subfamily_A 1350..1565 CDD:213230 63/223 (28%)
ABC2_membrane_3 <1913..2174 CDD:289468 43/272 (16%)
CcmA 2253..2567 CDD:224054
ABC_subfamily_A 2254..2477 CDD:213230
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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