DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9663 and Abcg4

DIOPT Version :9

Sequence 1:NP_608760.2 Gene:CG9663 / 33541 FlyBaseID:FBgn0031516 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_001100286.2 Gene:Abcg4 / 300664 RGDID:1305840 Length:646 Species:Rattus norvegicus


Alignment Length:784 Identity:282/784 - (35%)
Similarity:399/784 - (50%) Gaps:149/784 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SETHLPSRGSGTGSGALPRPTTPVPSKKLSSKRPPHLTLNIKAKSHDAPLAETENTVLSTSESVY 93
            :|..|.:.|.|.|.||:.....     ......||.||.::|         :.||.:        
  Rat     2 AEKALEAVGCGLGPGAVAMAVA-----LEDGAEPPVLTTHLK---------KVENHI-------- 44

  Fly    94 GTPLGATPVSSPANQSQRSQASQHSDESRNTSSTATSGGSIFPHEQYKTIKKINIGFENIRYTTK 158
                         .::||                       |.|...::  .::|.|..:.|:.:
  Rat    45 -------------TEAQR-----------------------FSHLPKRS--AVDIEFVELSYSVR 71

  Fly   159 FGVFQRET--KDVLMGLTGYFKSGELSAVIGPSGAGKSTLLNILSGYTTYGFTGDFRVNGNRRDL 221
            .|...|:.  |.:|..|:|.|...||..::|||||||||.:|||:||...|..|...|||..|||
  Rat    72 EGPCWRKRGYKTLLKCLSGKFCRRELIGIMGPSGAGKSTFMNILAGYRESGMKGQILVNGRPRDL 136

  Fly   222 KAFKSNVAFIRQDTSLQAFLSVKEAMHFAANLKIGTHMTHSEKRERVKCILEAIGMYENRHTRTG 286
            :.|:....:|.||..|...|:|.|||..:||||:..  ....|:|.|..||.|:|:....||||.
  Rat   137 RTFRKMSCYIMQDDMLLPHLTVLEAMMVSANLKLSE--KQEVKKELVTEILTALGLMSCSHTRTA 199

  Fly   287 QLSGGQKKRLAIALELVNNPPVLILDEPTTGLDSFTSNQLINLLKKLAIEGRTVICTIHQPSALT 351
            .|||||:|||||||||||||||:..||||:||||.:..|:::|:|.||..|||||||||||||..
  Rat   200 LLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAHGGRTVICTIHQPSAKL 264

  Fly   352 FAMFDHLYAIGEGKCIYAGGAQNLLPFLGALNLHCPESYNPADYLMEIATHDYDTAEDNQLEKLV 416
            |.|||.||.:.:|:||:.|...||:|:|..|.||||..:||||:::|:|:.:|  .:.|.:  |.
  Rat   265 FEMFDKLYILSQGQCIFKGVVTNLIPYLKGLGLHCPTYHNPADFIIEVASGEY--GDLNPM--LF 325

  Fly   417 ALMDNGRNEDYRQSKTARVAQLAAMKKVDQLMAAGLITPVTAPVMSTSVPAHFMQGNTFKPLTPI 481
            ..:.||            :..:|..|...:               ...||||             
  Rat   326 RAVQNG------------LCTMAEKKSSPE---------------KNEVPAH------------- 350

  Fly   482 NELSSRVWDSQTAGIGNAGSC--CKPKKKNKSRPAIELDP--SHLCKRQNIYATPFYRQLSILLV 542
                                |  |.|          ||||  ||      .:||....|..||..
  Rat   351 --------------------CPTCPP----------ELDPIESH------TFATSTLTQFCILFR 379

  Fly   543 RTFLLIWRDSSLTTMRFAIHLITGILIGTLYFGIGNDAAQTLNIFRYLFYTIMFIMYCAFSGILV 607
            ||||.|.||:.||.:||..|::.|:|||.||..||:||::..|...:||::::|:|:.|....::
  Rat   380 RTFLSILRDTVLTHLRFMSHVLIGVLIGLLYLHIGDDASKVFNNTGFLFFSMLFLMFAALMPTVL 444

  Fly   608 KFPLEFPIVSREHFNRWYSLRAYYVAITLADLPIQIICSALFIVPTYLMTQQPLELWRFGMFFLI 672
            .||||..:..|||.|.||||:|||:|.|:||:|.|::|..::....|.||.||.|..||.:|..:
  Rat   445 TFPLEMAVFMREHLNYWYSLKAYYLAKTMADVPFQVVCPVVYCSIVYWMTGQPAETSRFLLFSAL 509

  Fly   673 VFVTALVSQSIGLAVGAA-LSLKLGSILGPFFICPFLQFSGFFLMEKDAPVFLRWMFDISFLKYS 736
            ...||||:||:||.:||| .||::.:.:||....|.|.|||||:..|..|.:|:|...:|:::|.
  Rat   510 SIATALVAQSLGLLIGAASTSLQVATFVGPVTAIPVLLFSGFFVSFKTIPTYLQWSSYLSYVRYG 574

  Fly   737 LEGATMAIFGYDREPLACNELYCHLRHPQFILKSLDMANGNYTLALIFLFGVLVFLRILAFYIMS 801
            .||..:.|:|.:|..|.|.|.:|..|.||.||..||:......:..:.|....:.||:||:.::.
  Rat   575 FEGLILTIYGMERGHLTCLEDHCPFRDPQIILHELDVEEAKLYMDFLVLGIFFLALRLLAYLVLR 639

  Fly   802 FRLR 805
            :|::
  Rat   640 YRVK 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9663NP_608760.2 ABCG_EPDR 145..370 CDD:213180 114/226 (50%)
3a01204 149..808 CDD:273361 263/664 (40%)
ABC2_membrane 540..743 CDD:279410 90/203 (44%)
Abcg4NP_001100286.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335088
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177791at33208
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.710

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