DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9663 and abt-2

DIOPT Version :9

Sequence 1:NP_608760.2 Gene:CG9663 / 33541 FlyBaseID:FBgn0031516 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_490949.3 Gene:abt-2 / 171782 WormBaseID:WBGene00000020 Length:2146 Species:Caenorhabditis elegans


Alignment Length:896 Identity:172/896 - (19%)
Similarity:286/896 - (31%) Gaps:353/896 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 VFQRETKDV-LMGLTGYFKSGELSAVIGPSGAGKSTLLNILSG-YTTYGFTGDFRVNGNRRDLKA 223
            |::..||.: .:.|..|  .|:::.::|.:||||:|.::||.| |.....|........|.||:.
 Worm   937 VYENGTKALDCLNLRLY--EGQITGLLGHNGAGKTTTMSILCGLYAPSSGTAKIYQRDIRTDLRR 999

  Fly   224 FKSNVAFIRQDTSLQAFLSVKEAMHFAANLKIGTHMTHSEKRERVKCILEAIGMYENRHTRTGQL 288
            .:..:....|...|.:.|:|.|.:...|.||   .:..||...:|..||.::.:.|..:.....|
 Worm  1000 VRDVLGICPQHNVLFSHLTVSEQLRLFAALK---GVPDSELTSQVDEILASVSLTEKANKLASTL 1061

  Fly   289 SGGQKKRLAIALELVNNPPVLILDEPTTGLDSFTSNQLINLLKKLAIEGRTVICTIH-------- 345
            |||.|:||.|.:..:.....:||||||.|:|......:..||::.. ||||::.:.|        
 Worm  1062 SGGMKRRLCIGIAFIGGSRFVILDEPTAGVDVTARKDIWKLLQRNK-EGRTILLSTHHMDEADVL 1125

  Fly   346 ------------QPSAL--TFAMFDHLYAIGEGKCIYAGGA------QNLLP-FLGALNLHCPES 389
                        :|..|  ...:|.|.||:...:..|...:      |.::| ||.||    .|.
 Worm  1126 SDRIAILSQDFEKPDLLDGKRLIFQHFYALLVCRINYTLKSKRTFLFQVIIPLFLLAL----AEL 1186

  Fly   390 YNPADYLMEIAT---------------------------HDYDTAEDNQLEKLV----------- 416
            :    .|::::|                           :.:||||::....::           
 Worm  1187 F----VLLQVSTARPDLMVSMPPLPLETSIMGNHSDFYVNSWDTAENSTANDILHAMFSSPGTGP 1247

  Fly   417 --------ALMDN-------------GRN------------------------------------ 424
                    .|:|.             |||                                    
 Worm  1248 RCAKDVPNDLLDTMRRELMFRNRYGFGRNKPAPGVDKDSVDNEYQCQNIQGEFDYTEDISNATYN 1312

  Fly   425 ----------------EDYRQSKT-------------------------ARVAQLA--------- 439
                            ||::.::|                         .|.||||         
 Worm  1313 APIYCGCEDFGWNCTLEDWKWNETNWLRLNTTDRIFDLTGRNLTQFRLITRFAQLANTTAPFFLG 1377

  Fly   440 --------------------------AMKKVDQLM------AAGLITPVTAPVMSTSVPAHFMQG 472
                                      .:|.:.|.|      ..| |.|.|..|:..     |.|.
 Worm  1378 GFSLGHVNQRAQSQADIDTSKRGWLETIKDIAQSMRIINLNTTG-IEPATPKVLDP-----FAQN 1436

  Fly   473 NTFKPLTPINEL--------------SSRVW----------------------DSQTAGIGNAGS 501
            .|...:  :|:|              ::::|                      |.:..||.... 
 Worm  1437 ITLNQV--VNDLLQNLDVRENVKVWFNNKIWPGFPIASNILSNALLRQEDYAIDPEDLGILTMN- 1498

  Fly   502 CCKPKKKNKSRPAIELDPSHLCKRQNIYATPFYRQLSILLVRTFLLIWRDSSLTTMRFAIHLITG 566
              .|..|..|:   .||       ||  |..|.:.|::..:...||:   .|:....|.::|:..
 Worm  1499 --HPMNKTISQ---TLD-------QN--ALKFTQALAVFRITILLLV---LSMIPAGFTVYLVED 1546

  Fly   567 ILIGTLYFG-IGNDAAQTLNIFRYLF----YT-----IMFIMYC-----------AFSGILVKFP 610
            .:...|:.. :|.....|..:..||:    ||     ||.|..|           .|...|:.|.
 Worm  1547 RICEALHLQLVGGLRKVTYWVTSYLYDMVVYTLVIIVIMLIYLCFRVSDFTADGATFFAFLLLFF 1611

  Fly   611 LE--FPIVSREHFNRWYSLRAY-YVAITLADLPIQIICSALFIVPTYLMTQQPLELWRFGMFFLI 672
            :.  ..|:....|.:.:|:.|. :|.|.:....:.|:|:...|:...||.|.| .|........|
 Worm  1612 VHGMSTILYAYVFQKAFSVAALSFVLIAIGSYFVGIVCALTVIMLESLMVQDP-SLIPAHTVCSI 1675

  Fly   673 VFVTALVSQSIGLAVGAALSLKLGSILGPFFICPFLQFSGFFLMEKDAPVFLRWMFDISFLKYSL 737
            ||: .|...::|:|:...|.:.....:|           ..||.:.:.|..:..:...|.|.:..
 Worm  1676 VFL-VLPQYNLGIAIFRGLMIYQVRAIG-----------SNFLQQMNRPDMINQLPLPSLLAFDQ 1728

  Fly   738 EG------------ATMAI-------FGYD-------------REPLACNE 756
            .|            ||:.:       ||:.             |||..|::
 Worm  1729 MGIHIMCLFIHVIIATICLIFSQMDEFGFVRKRERNLTDAMMLREPSTCDD 1779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9663NP_608760.2 ABCG_EPDR 145..370 CDD:213180 64/232 (28%)
3a01204 149..808 CDD:273361 172/896 (19%)
ABC2_membrane 540..743 CDD:279410 49/238 (21%)
abt-2NP_490949.3 rim_protein 39..2117 CDD:130324 172/896 (19%)
ABC_subfamily_A 929..1134 CDD:213230 57/202 (28%)
ABC_subfamily_A 1802..2024 CDD:213230
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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