DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9663 and abcg4

DIOPT Version :10

Sequence 1:NP_608760.2 Gene:CG9663 / 33541 FlyBaseID:FBgn0031516 Length:808 Species:Drosophila melanogaster
Sequence 2:XP_004916110.1 Gene:abcg4 / 101734071 XenbaseID:XB-GENE-22063023 Length:639 Species:Xenopus tropicalis


Alignment Length:730 Identity:272/730 - (37%)
Similarity:394/730 - (53%) Gaps:121/730 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 PLGATPVS--SPANQSQRS--------QASQHSDESRNTSSTATSGGSIFPHEQYKTIKKINIGF 150
            |:.||.::  .|....|.:        :...|..::|.           |.|...::  .::|.|
 Frog     8 PIQATGIAEDGPCQHPQETTLLATHLKKVENHITDARR-----------FCHLPKRS--AVDIEF 59

  Fly   151 ENIRYTTKFGVFQRET--KDVLMGLTGYFKSGELSAVIGPSGAGKSTLLNILSGYTTYGFTGDFR 213
            :::.|:.:.|...|:.  |.:|..|:|.|.|.||..::||||||||||:|||:||...|.||...
 Frog    60 KDLSYSVREGPCWRKRGYKTLLKCLSGMFCSRELIGIMGPSGAGKSTLMNILAGYRESGMTGQIL 124

  Fly   214 VNGNRRDLKAFKSNVAFIRQDTSLQAFLSVKEAMHFAANLKIGTHMTHSEKRERVKCILEAIGMY 278
            |||.:|:|:.|:....:|.||..|...|:|||||..:.|||:...|  ..|::.|..||.|:|:.
 Frog   125 VNGKQRELRTFRKMSCYIMQDDMLLPHLTVKEAMMVSTNLKLNEKM--EVKKKLVNEILTALGLL 187

  Fly   279 ENRHTRTGQLSGGQKKRLAIALELVNNPPVLILDEPTTGLDSFTSNQLINLLKKLAIEGRTVICT 343
            :...|||..|||||:|||||||||||||||:..||||:||||.:..|:::||..||..|||:|||
 Frog   188 DCSGTRTLFLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLLNSLAQGGRTIICT 252

  Fly   344 IHQPSALTFAMFDHLYAIGEGKCIYAGGAQNLLPFLGALNLHCPESYNPADYLMEIATHDYDTAE 408
            ||||||..|.||:.||.:.:|:|||.|...:|:|:|..|.||||..:||||:::|:|:.:|    
 Frog   253 IHQPSAKLFEMFNKLYILSQGQCIYRGSVTHLIPYLKGLGLHCPTYHNPADFIIELASGEY---- 313

  Fly   409 DNQLEKLVALMDNGRNEDYRQSKTARVAQLAAMKKVDQLMAAGLITPVTAPVMSTSVPAHFMQGN 473
                                                      |.:.|:                 
 Frog   314 ------------------------------------------GDLNPL----------------- 319

  Fly   474 TFKPLTPINELSSRVWDSQTAGIGNAGSCCKPKKKNKSRPAIELDPSHLCK-------RQNIYAT 531
                      |...|.|         |.|  |..::||:.. :||..| |.       ..:.:||
 Frog   320 ----------LFRAVED---------GLC--PITRDKSQQT-KLDQEH-CPNDVSVHVESHTFAT 361

  Fly   532 PFYRQLSILLVRTFLLIWRDSSLTTMRFAIHLITGILIGTLYFGIGNDAAQTLNIFRYLFYTIMF 596
            ....|..||..||||.|.||:.||.:||..||..|:|||.||..||:||::..|...:||::::|
 Frog   362 SSLNQFCILFKRTFLSILRDTVLTHLRFMSHLCIGVLIGLLYLHIGDDASKVFNNTGFLFFSMLF 426

  Fly   597 IMYCAFSGILVKFPLEFPIVSREHFNRWYSLRAYYVAITLADLPIQIICSALFIVPTYLMTQQPL 661
            :|:.|....::.||||..:..|||.|.||||:|||:|.|:||:|.||:|...:....|.||.||.
 Frog   427 LMFAALMPTVLTFPLEMSVFLREHLNYWYSLKAYYLAKTMADVPFQIVCPVAYCSIVYWMTSQPP 491

  Fly   662 ELWRFGMFFLIVFVTALVSQSIGLAVG-AALSLKLGSILGPFFICPFLQFSGFFLMEKDAPVFLR 725
            |:.||.:|..:...||||:||:||.:| |:.||::.:.:||....|.|.|||||:..|..|.:|:
 Frog   492 EVSRFLLFSALATSTALVAQSLGLLIGVASNSLQVATFVGPVTAIPVLLFSGFFVSFKTIPTYLQ 556

  Fly   726 WMFDISFLKYSLEGATMAIFGYDREPLACNELYCHLRHPQFILKSLDMANGNYTLALIFLFGVLV 790
            |...||:::|..||..:||:|.||.||.|.||.|..:.||.:|:.||:.:....:..:.|.|..:
 Frog   557 WCSYISYVRYGFEGVILAIYGMDRAPLQCRELPCTFQLPQQVLQELDVEDAKLYVDFLVLGGFFL 621

  Fly   791 FLRILAFYIMSFRLR 805
            .||:||:.::.:|::
 Frog   622 GLRLLAYLVLRYRVK 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9663NP_608760.2 3a01204 149..808 CDD:273361 262/667 (39%)
abcg4XP_004916110.1 3a01204 40..639 CDD:273361 266/698 (38%)

Return to query results.
Submit another query.