DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9663 and abcg1

DIOPT Version :9

Sequence 1:NP_608760.2 Gene:CG9663 / 33541 FlyBaseID:FBgn0031516 Length:808 Species:Drosophila melanogaster
Sequence 2:XP_002942182.2 Gene:abcg1 / 100496811 XenbaseID:XB-GENE-996335 Length:664 Species:Xenopus tropicalis


Alignment Length:762 Identity:273/762 - (35%)
Similarity:413/762 - (54%) Gaps:121/762 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 SSKRPPHLTLNIKAKSHDAPLAETENTVLSTSESVYGTPLGATPVSSPANQSQRSQASQHSDESR 122
            :|..||.:.           :|:.::..:|..|          .||:.|...:....:.|..:..
 Frog    13 NSMNPPAVM-----------MADPKSVCVSLDE----------VVSNCAGTQETPLLNGHLKKVD 56

  Fly   123 NTSSTATSGGSIFPHEQYKTIKK---INIGFENIRYTTKFGVFQRET--KDVLMGLTGYFKSGEL 182
            ||.:.|         :::.::.:   :||.|:::.::...|.:.::.  |.:|.|::|.|..|||
 Frog    57 NTLTEA---------QRFSSLPRRPAVNIEFKDLSFSIPEGPWWKKKGYKTLLKGISGKFHCGEL 112

  Fly   183 SAVIGPSGAGKSTLLNILSGYTTYGFTGDFRVNGNRRDLKAFKSNVAFIRQDTSLQAFLSVKEAM 247
            :|::||||||||||:|||:||...|..|:..:||..|||::|:....:|.||..|...|:|:|||
 Frog   113 AAIMGPSGAGKSTLMNILAGYRETGMKGEVLINGQPRDLRSFRKVSCYIMQDDMLLPHLTVQEAM 177

  Fly   248 HFAANLKIGTHMTHSEK----RERVKCILEAIGMYENRHTRTGQLSGGQKKRLAIALELVNNPPV 308
            ..:|:||:      .||    :|.||.||.|:|:.....||||.|||||:|||||||||||||||
 Frog   178 MVSAHLKL------QEKDEGRKEMVKEILTALGLLPCADTRTGSLSGGQRKRLAIALELVNNPPV 236

  Fly   309 LILDEPTTGLDSFTSNQLINLLKKLAIEGRTVICTIHQPSALTFAMFDHLYAIGEGKCIYAGGAQ 373
            :..||||:||||.:..|:::|:|.||..||.:|||||||||..|.:||.||.:.:|:|||.|...
 Frog   237 MFFDEPTSGLDSSSCFQVVSLMKSLAQGGRNIICTIHQPSAKLFELFDQLYVLSQGQCIYRGKVS 301

  Fly   374 NLLPFLGALNLHCPESYNPADYLMEIATHDYDTAEDNQLEKLVALMDNGRNEDYRQSKTARVAQL 438
            ||:|:|..|.|:||..:||||::||:|:.:|.   |.....:.|:.||                 
 Frog   302 NLVPYLRVLGLNCPTYHNPADFIMEVASGEYG---DQNPHLVRAVQDN----------------- 346

  Fly   439 AAMKKVDQLMAAGLITPVTAPVMSTSVPAHFMQGNTFKPLTPINELSSRVWDSQTAGIGNAGSCC 503
              :.:|:                    |...:.|.        ||.|..:|              
 Frog   347 --LCEVE--------------------PKRDLCGE--------NEQSPLMW-------------- 367

  Fly   504 KPKKKNKSRPAIELDPSHLCKRQNIYATPFYRQLSILLVRTFLLIWRDSSLTTMRFAIHLITGIL 568
                   .||..:..|:..|   :.::.....|..||..|||:.|.|||.||.:|...|:..|||
 Frog   368 -------HRPDEDPSPTEGC---HSFSASCLTQFCILFKRTFINIMRDSVLTHLRITSHIGIGIL 422

  Fly   569 IGTLYFGIGNDAAQTLNIFRYLFYTIMFIMYCAFSGILVKFPLEFPIVSREHFNRWYSLRAYYVA 633
            ||.||.||||:|.:.|:...:||::::|:|:.|....::.||||..:..|||.|.||||:|||:|
 Frog   423 IGLLYLGIGNEAKKVLSNSGFLFFSMLFLMFAALMPTVLTFPLEMGVFLREHLNYWYSLKAYYLA 487

  Fly   634 ITLADLPIQIICSALFIVPTYLMTQQPLELWRFGMFFLIVFVTALVSQSIGLAVGAA-LSLKLGS 697
            .|:||:|.||:....:....|.||.||.:..||.:|..:..:|:||:||:||.:||| .||::.:
 Frog   488 KTMADVPFQIMFPVAYCSIVYWMTSQPSDALRFILFAALGTMTSLVAQSLGLLIGAASTSLQVAT 552

  Fly   698 ILGPFFICPFLQFSGFFLMEKDAPVFLRWMFDISFLKYSLEGATMAIFGYDREPLAC-NELYCHL 761
            .:||....|.|.|||||:.....|.:|:||..:|:::|..||..::|:|.|||.|.| .:..||.
 Frog   553 FVGPVTAIPVLLFSGFFVSFDTIPSYLQWMSYMSYVRYGFEGVILSIYGLDREDLHCEKDETCHF 617

  Fly   762 RHPQFILKSLDMANGNYTLALIFLFGVLVFLRILAFYIMSFRLRLFR 808
            :..:.|||.||:.:....|..|.|....|.||:.|::::.:::|..|
 Frog   618 QKSEAILKELDVEDAKLYLDFIILGVFFVTLRLTAYFVLKYKIRAER 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9663NP_608760.2 ABCG_EPDR 145..370 CDD:213180 114/233 (49%)
3a01204 149..808 CDD:273361 257/666 (39%)
ABC2_membrane 540..743 CDD:279410 89/203 (44%)
abcg1XP_002942182.2 3a01204 59..664 CDD:273361 260/693 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I9946
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.010

Return to query results.
Submit another query.