DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9664 and PDR18

DIOPT Version :9

Sequence 1:NP_722889.1 Gene:CG9664 / 33540 FlyBaseID:FBgn0031515 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_014468.3 Gene:PDR18 / 855807 SGDID:S000005353 Length:1333 Species:Saccharomyces cerevisiae


Alignment Length:607 Identity:157/607 - (25%)
Similarity:286/607 - (47%) Gaps:84/607 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 FSQVSYSLKGATKGSTPIINEACGVFKSGRLTAILGPSGAGKSTLLNALAGFKLQGVTGQFLLNG 89
            :..||:::..:: |...:::...|....|.|||::|.|||||:||||.||...:..:||..|::|
Yeast   731 WKNVSFTIPHSS-GQRKLLDSVSGYCVPGTLTALIGESGAGKTTLLNTLAQRNVGTITGDMLVDG 794

  Fly    90 RPRDIMSFRKMSAYIAQNFVMLNLLTVEETLRVSTDLKMPSSTAAQEKQKIIDDIIDILQLQSCR 154
            .|.| .||::.:.|:.|..:.:..|||:|:|:.|..::.|.|....||.:.::.||.||::|...
Yeast   795 LPMD-ASFKRRTGYVQQQDLHVAELTVKESLQFSARMRRPQSIPDAEKMEYVEKIISILEMQEFS 858

  Fly   155 RTLVKNLSGG----EHKRLSIGIELVTNPP-IMFFDEPTSGLDCVGSYQVICHLQRLAHDGRIVV 214
            ..||..:..|    :.|:||||:|||..|. ::|.||||||||...::.|:..|:|||..|:.::
Yeast   859 EALVGEIGYGLNVEQRKKLSIGVELVGKPDLLLFLDEPTSGLDSQSAWAVVKMLKRLALAGQSIL 923

  Fly   215 CVVHQPGSRLFQLFDDVLVLAH-GEVLYAGE----QREMLPTFAQSG-HICPQYYNPADFALEVC 273
            |.:|||.:.||:.||.:|:|.. |:.:|.||    ...::..|.::| ..|.|..|||::.||..
Yeast   924 CTIHQPSATLFEQFDRLLLLGKGGQTIYFGEIGKNSSSVIKYFEKNGARKCQQNENPAEYILEAI 988

  Fly   274 SQSSTTERCESLITQN-----KMMHSTASNVVKL-QVDEETALIDVHKDALDLSHLRGKEQVGFW 332
            ...:|..     :.||     :..|..|:...|: .:.::.:...:||.|...|    |....:.
Yeast   989 GAGATAS-----VQQNWPDIWQKSHEYANINEKINDMIKDLSSTTLHKTATRAS----KYATSYS 1044

  Fly   333 TQLSVLLRRHLRSMSRDMFAVQMRLVMHVVVALLLGVVYWQIGGDAQKIVSNV-SCLFFVILFVF 396
            .|...:|:|...:..|::..:..::::.::..|.:|..::.:|.:|..:.::: :|...:::...
Yeast  1045 YQFHHVLKRSSLTFWRNLNYIMAKMMLLMISGLFIGFTFFHVGVNAIGLQNSLFACFMAIVISAP 1109

  Fly   397 AGNAMPSILLCMQDSAVFIREYY------NGWYSLGAYYLSKVLADLPLQLTCPTMFISIGYFMT 455
            |.|.       :|:.|...:|.|      :..:......::..|.:||..|...|:|....||..
Yeast  1110 ATNQ-------IQERATVAKELYEVRESKSNMFHWSLLLITHYLNELPYHLLFSTIFFVSSYFPL 1167

  Fly   456 GQPPEFQR---FAMCWALCVMTAFIG------------HFIGVIAGSLFTMQLAIFLVPSATIPF 505
            |...|..|   |.:.:|:.....:||            ....||.|.:.:..|:..   .|..|.
Yeast  1168 GVFTEASRSSVFYLNYAILFQLYYIGLALMILYMSPNLQSANVIVGFILSFLLSFC---GAVQPA 1229

  Fly   506 LLFSGFFI---RLNELSWFL----------RPI-C---DVSFFR----YIFEGLMRAIYGYDRGE 549
            .|..||:.   :|:..::||          :|: |   ::|.|.    .......:..:.:..|.
Yeast  1230 SLMPGFWTFMWKLSPYTYFLQNLVGLLMHDKPVRCSKKELSLFNPPVGQTCGEFTKPFFEFGTGY 1294

  Fly   550 L---ECYATSNFCYYRTAEQFL 568
            :   :..|...:|.|:..:::|
Yeast  1295 IANPDATADCAYCQYKVGDEYL 1316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9664NP_722889.1 ABCG_EPDR 20..243 CDD:213180 84/223 (38%)
EcfA2 23..247 CDD:224047 86/231 (37%)
ABC2_membrane 338..539 CDD:279410 45/243 (19%)
YadH <388..547 CDD:223912 37/200 (19%)
PDR18NP_014468.3 3a01205 1..1333 CDD:273362 157/607 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I1517
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13430
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
TreeFam 00.000 Not matched by this tool.
44.030

Return to query results.
Submit another query.