DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9664 and ABCG28

DIOPT Version :9

Sequence 1:NP_722889.1 Gene:CG9664 / 33540 FlyBaseID:FBgn0031515 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_200882.4 Gene:ABCG28 / 836195 AraportID:AT5G60740 Length:1109 Species:Arabidopsis thaliana


Alignment Length:641 Identity:167/641 - (26%)
Similarity:278/641 - (43%) Gaps:142/641 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NAVQAQPNGLGPQKQKALELHFSQVSYSLKGATKGSTPIINEACGVFKSGRLTAILGPSGAGKST 68
            :.|.:..|.:..:|:..:|:.|..:|.:|||..|   .::....|....||::|::|||||||:|
plant   480 SGVISMANDIDIRKRPMIEVAFKDLSITLKGKNK---HLMRCVTGKLSPGRVSAVMGPSGAGKTT 541

  Fly    69 LLNALAGFKLQG--VTGQFLLNGRPRDIMSFRKMSAYIAQNFVMLNLLTVEETLRVSTDLKMPSS 131
            .|.||.| |..|  :||..|:||:...|.|::|:..::.|:.::...|||||.|..|...::|:.
plant   542 FLTALTG-KAPGCIMTGMILVNGKVESIQSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLPAD 605

  Fly   132 TAAQEKQKIIDDIIDILQLQSCRRTLV-----KNLSGGEHKRLSIGIELVTNPPIMFFDEPTSGL 191
            ....||..:::.:|:.|.||..|.:||     :.:|||:.||:::|:|:|..|.::..|||||||
plant   606 LPKPEKVLVVERVIESLGLQHVRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGL 670

  Fly   192 DCVGSYQVICHLQRLAHDGRIVVCVVHQPGSRLFQLFDDVLVLAHGEVL-YAGEQREMLPTFAQS 255
            |...|..::..|:|.|.:|..:..|||||...||::|||:::||.|.:: |.|..:::...|:..
plant   671 DSSSSQLLLRALRREALEGVNICMVVHQPSYTLFRMFDDLILLAKGGLICYQGPVKKVEEYFSSL 735

  Fly   256 GHICPQYYNPADFALEVCS---QSSTTERCESLITQNK-----MMH-----------------ST 295
            |.:.|:..||.|:.:::..   :.||:    |.:|..:     |:|                 |:
plant   736 GIVVPERVNPPDYYIDILEGILKPSTS----SGVTYKQLPVRWMLHNGYPVPMDMLKSIEGMASS 796

  Fly   296 AS------------NVVKLQVDEET-----------ALIDVHKDAL--------DLSHLRGKEQV 329
            ||            :||.   |:.|           |.:::.||.|        |||.   :|..
plant   797 ASGENSAHGGSAHGSVVG---DDGTSFAGEFWQDVKANVEIKKDNLQNNFSSSGDLSE---REVP 855

  Fly   330 GFWTQLSVLLRRHLRSMSRDMFAVQMRLVMHVVVALLLGVVYWQIGGDAQKIVSNVSCLFFVILF 394
            |.:.|....|.|    :.:........|.:..::.||.|:....:...:.:....:...:.||..
plant   856 GVYQQYRYFLGR----LGKQRLREARTLAVDYLILLLAGICLGTLAKVSDETFGAMGYTYTVIAV 916

  Fly   395 VFAGNAMPSILLC--------MQDSAVFIREYYNGWYSLGAYYLSKVLADLPLQLTCPTMFISIG 451
                     .|||        ..|...:.||...|..|| ||:|:|...|....:..|.:::|:.
plant   917 ---------SLLCKITALRSFSLDKLHYWRESRAGMSSL-AYFLAKDTVDHFNTIVKPLVYLSMF 971

  Fly   452 YFMT---GQPPEFQRFAMCWALCVMTAFIGHFIGVIAGSLFTMQLAIFLVP------SATIPFLL 507
            ||..   ....:.....:|...||            .|..:|  |||...|      |..:|.:|
plant   972 YFFNNPRSTVTDNYVVLICLVYCV------------TGIAYT--LAILFEPGPAQLWSVLLPVVL 1022

  Fly   508 -FSGFFIRLNELSWFLRPICDVSFFRYIFEGLMRAIYGYDRGELECYATSNFCYYR 562
             ........|::...:..:|                  |.|..||.:..||...|:
plant  1023 TLIATSTNDNKIVDSISELC------------------YTRWALEAFVVSNAQRYK 1060

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9664NP_722889.1 ABCG_EPDR 20..243 CDD:213180 87/230 (38%)
EcfA2 23..247 CDD:224047 87/231 (38%)
ABC2_membrane 338..539 CDD:279410 40/218 (18%)
YadH <388..547 CDD:223912 35/176 (20%)
ABCG28NP_200882.4 ABCG_EPDR 496..723 CDD:213180 87/230 (38%)
3a01204 513..1103 CDD:273361 158/608 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 121 1.000 Domainoid score I1855
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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