DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9664 and ABCG20

DIOPT Version :9

Sequence 1:NP_722889.1 Gene:CG9664 / 33540 FlyBaseID:FBgn0031515 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_190919.1 Gene:ABCG20 / 824519 AraportID:AT3G53510 Length:739 Species:Arabidopsis thaliana


Alignment Length:619 Identity:168/619 - (27%)
Similarity:303/619 - (48%) Gaps:80/619 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADNAVQAQPNGLGPQKQKALELHFSQVSYSLKGATK-------GSTP------------IINEA 46
            :|.|...:.|:...|.....: |.|..::||:|...|       |::|            ::|..
plant    67 VASNFWSSVPSSRVPSSSPFV-LSFKDLTYSVKIKKKFKPFPCCGNSPFDGNDMEMNTKVLLNGI 130

  Fly    47 CGVFKSGRLTAILGPSGAGKSTLLNALAG-FKLQGVTGQFLLNGRPRDIMSFRKMSAYIAQNFVM 110
            .|..:.|.:.|:||.||:|||||::|||. ...:.:.|...|||...:....:.:|||:.|:.::
plant   131 SGEAREGEMMAVLGASGSGKSTLIDALANRISKESLRGDITLNGEVLESSLHKVISAYVMQDDLL 195

  Fly   111 LNLLTVEETLRVSTDLKMPSSTAAQEKQKIIDDIIDILQLQSCRRTLV-----KNLSGGEHKRLS 170
            ..:|||||||..|.:.::|||.:.::|:..:..:||.|.|::..:|::     :.:||||.:|:|
plant   196 FPMLTVEETLMFSAEFRLPSSLSKKKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVS 260

  Fly   171 IGIELVTNPPIMFFDEPTSGLDCVGSYQVICHLQRLAHDGRIVVCVVHQPGSRLFQLFDDVLVLA 235
            ||.:::.:|.|:|.||||||||...:|.|:..|||:|..|.||:..:|||..|:..|.|.::.|:
plant   261 IGTDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDKLIFLS 325

  Fly   236 HGEVLYAGEQREMLPTFAQSGHICPQYYNPADFALEVCSQ-SSTTERCESLITQNKMMHS--TAS 297
            .|..:|:|....:...|::.||..|:..|..:|||::..: ..:.|..:||:..:|...:  |:|
plant   326 RGNTVYSGSPTHLPQFFSEFGHPIPENENKPEFALDLIRELEDSPEGTKSLVEFHKQWRAKQTSS 390

  Fly   298 NVVKLQVDEETALIDVHKDALDLSHLRGKEQVG--------------FWTQLSVLLRRHLRSMSR 348
               :.:.:...:|    |||:..|..|||...|              |||::.|:.:|.:.:..|
plant   391 ---QSRRNTNVSL----KDAISASISRGKLVSGATNLRSSFQTFANPFWTEMLVIGKRSILNSRR 448

  Fly   349 --DMFAVQMRLVMHVVVALLLGVVYWQIGGDAQKIVSNVSCLFFVI--LFVFAGNAMPSILLCMQ 409
              ::|.:::..|:  |..::|..::|::....:.|...:....|.:  .|.....|:|..|   |
plant   449 QPELFGIRLGAVL--VTGMILATIFWKLDNSPRGIQERLGFFAFAMSTTFYTCAEAIPVFL---Q 508

  Fly   410 DSAVFIREYYNGWYSLGAYYLSKVLADLPLQLTCPTMFISIGYFMTGQPPEFQRFAMCWALCVMT 474
            :..:|:||.....|...:|.|:..:..:|..:.....|.:..:...|.....:.| :.:...::|
plant   509 ERYIFMRETAYNAYRRSSYVLAHTIISIPALIILSAAFAASTFSAVGLAGGSEGF-LFFFFTILT 572

  Fly   475 AFI--GHFIGVIAGSLFTMQLAIFLVPSATIPFLLFSGFFIRLNELS----WFLRPICDVSFFRY 533
            ||.  ..|:..::|.:..:.:...:|.:....|||||||||..:.:.    ||..    :|..:|
plant   573 AFWAGSSFVTFLSGVVSHVMIGFTVVVAILAYFLLFSGFFISRDRIPLYWIWFHY----LSLVKY 633

  Fly   534 IFEGLMRAIYGYDRGELECYATSNFCYYRTAEQF 567
            .:||::       :.|.|   ....|:.|..:.|
plant   634 PYEGVL-------QNEFE---DPTKCFVRGIQMF 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9664NP_722889.1 ABCG_EPDR 20..243 CDD:213180 86/247 (35%)
EcfA2 23..247 CDD:224047 87/248 (35%)
ABC2_membrane 338..539 CDD:279410 45/210 (21%)
YadH <388..547 CDD:223912 37/166 (22%)
ABCG20NP_190919.1 P-loop_NTPase 119..333 CDD:304359 78/213 (37%)
3a01204 120..738 CDD:273361 156/565 (28%)
ABC2_membrane 438..641 CDD:279410 45/219 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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