DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9664 and ABCG2

DIOPT Version :9

Sequence 1:NP_722889.1 Gene:CG9664 / 33540 FlyBaseID:FBgn0031515 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_181272.1 Gene:ABCG2 / 818312 AraportID:AT2G37360 Length:755 Species:Arabidopsis thaliana


Alignment Length:601 Identity:161/601 - (26%)
Similarity:278/601 - (46%) Gaps:100/601 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LHFSQVSYSLK----------------GATKGSTPIINEACGVFKSGRLTAILGPSGAGKSTLLN 71
            |.|:.::||:|                .::..:..::|...|..:.|.:.|:||.||:|||||::
plant    98 LSFTDLTYSVKIQKKFNPLACCRRSGNDSSVNTKILLNGISGEAREGEMMAVLGASGSGKSTLID 162

  Fly    72 ALAG-FKLQGVTGQFLLNGRPRDIMSFRKMSAYIAQNFVMLNLLTVEETLRVSTDLKMPSSTAAQ 135
            |||. .....:.|...|||...:....:.:|||:.|:.::..:|||||||..|.:.::|.|.:.:
plant   163 ALANRIAKDSLRGSITLNGEVLESSMQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKK 227

  Fly   136 EKQKIIDDIIDILQLQSCRRTLV-----KNLSGGEHKRLSIGIELVTNPPIMFFDEPTSGLDCVG 195
            :|:..:..:||.|.|:|..:|::     :.:||||.:|:|||.:::.:|.|:|.||||||||...
plant   228 KKKARVQALIDQLGLRSAAKTVIGDEGHRGVSGGERRRVSIGNDIIHDPIILFLDEPTSGLDSTS 292

  Fly   196 SYQVICHLQRLAHDGRIVVCVVHQPGSRLFQLFDDVLVLAHGEVLYAGEQREMLPTFAQSGHICP 260
            :|.||..|||:|..|.||:..:|||..|:..|.|.::.|:.|..:|:|....:...|::..|..|
plant   293 AYMVIKVLQRIAQSGSIVIMSIHQPSYRIMGLLDQLIFLSKGNTVYSGSPTHLPQFFSEFKHPIP 357

  Fly   261 QYYNPADFALEVCSQ-SSTTERCESLITQNKMMHSTA-----------SNVVKLQVDEETALIDV 313
            :..|..:|||::..: ..:||..:.|:..:|...:..           :||..|           
plant   358 ENENKTEFALDLIRELEYSTEGTKPLVEFHKQWRAKQAPSYNNNNKRNTNVSSL----------- 411

  Fly   314 HKDALDLSHLRGKEQVG-------------------FWTQLSVLLRRHLRSMSRDMFAVQMRLVM 359
             |:|:..|..|||...|                   ||.::.|:.:|.:.:..|....:.|||..
plant   412 -KEAITASISRGKLVSGATNNNSSNLTPSFQTFANPFWIEMIVIGKRAILNSRRQPELLGMRLGA 475

  Fly   360 HVVVALLLGVVYWQIGGDAQKIVSNVSCLFFVI--LFVFAGNAMPSILLCMQDSAVFIREYYNGW 422
            .:|..::|..::..:....:.....:....|.:  .|.....|:|..|   |:..:|:||.....
plant   476 VMVTGIILATMFTNLDNSPKGAQERLGFFAFAMSTTFYTCAEAIPVFL---QERYIFMRETAYNA 537

  Fly   423 YSLGAYYLSKVLADLPLQLTCPTMFISIGYFMTGQPP--------EFQRFAMCWALCVMTAFIGH 479
            |...:|.||:.:..:|..:.....|.:..::..|...        .|...|..||   .::|:..
plant   538 YRRSSYVLSQSIISIPALIVLSASFAATTFWAVGLDGGANGFFFFYFTILASFWA---GSSFVTF 599

  Fly   480 FIGVIAGSL--FTMQLAIFLVPSATIPFLLFSGFFIRLNELS----WFLRPICDVSFFRYIFEGL 538
            ..|||...:  ||:.:||...      |||||||||..:.:.    ||..    :|..:|.:||:
plant   600 LSGVIPNVMLGFTVVVAILAY------FLLFSGFFISRDRIPVYWLWFHY----ISLVKYPYEGV 654

  Fly   539 MRAIYGYDRGELECYA 554
            ::..:   :....|:|
plant   655 LQNEF---QNPTRCFA 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9664NP_722889.1 ABCG_EPDR 20..243 CDD:213180 84/241 (35%)
EcfA2 23..247 CDD:224047 85/245 (35%)
ABC2_membrane 338..539 CDD:279410 50/216 (23%)
YadH <388..547 CDD:223912 43/174 (25%)
ABCG2NP_181272.1 3a01204 95..754 CDD:273361 161/601 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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