DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9664 and ABCG34

DIOPT Version :9

Sequence 1:NP_722889.1 Gene:CG9664 / 33540 FlyBaseID:FBgn0031515 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_181179.2 Gene:ABCG34 / 818211 AraportID:AT2G36380 Length:1453 Species:Arabidopsis thaliana


Alignment Length:630 Identity:177/630 - (28%)
Similarity:296/630 - (46%) Gaps:72/630 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GPQKQ-----KALELHFSQVSY--------SLKGATKGSTPIINEACGVFKSGRLTAILGPSGAG 65
            ||:|.     :.|.|.|:.|:|        ..:|.......::.:..|.|:.|.|||::|.||||
plant   838 GPKKGMVLPFQPLSLAFNNVNYYVDMPAEMKAQGVEGDRLQLLRDVGGAFRPGVLTALVGVSGAG 902

  Fly    66 KSTLLNALAGFKLQG-VTGQFLLNGRPRDIMSFRKMSAYIAQNFVMLNLLTVEETLRVSTDLKMP 129
            |:||::.|||.|..| |.|...::|.|::..:|.::|.|..||.:....:||.|:|..|..|::.
plant   903 KTTLMDVLAGRKTGGYVEGSINISGYPKNQATFARVSGYCEQNDIHSPHVTVYESLIYSAWLRLS 967

  Fly   130 SSTAAQEKQKIIDDIIDILQLQSCRRTL-----VKNLSGGEHKRLSIGIELVTNPPIMFFDEPTS 189
            :....:.::..:::::::::|:..|.::     |..||..:.|||:|.:|||.||.|:|.|||||
plant   968 ADIDTKTREMFVEEVMELVELKPLRNSIVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1032

  Fly   190 GLDCVGSYQVICHLQRLAHDGRIVVCVVHQPGSRLFQLFDDVLVLAH-GEVLYA---GEQREMLP 250
            |||...:..|:..::.....||.|||.:|||...:|:.||::|::.. |:|:||   |...:.|.
plant  1033 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKRGGQVIYAGTLGHHSQKLV 1097

  Fly   251 TFAQSGHICPQY---YNPADFALEVCSQSSTTERCESLITQNKMMHSTASNVVKLQVDEETALID 312
            .:.::....|:.   ||||.:.|:|     ||...||.::.:.......|:|.:...:....|..
plant  1098 EYFEAIEGVPKIKDGYNPATWMLDV-----TTPSMESQMSVDFAQIFVNSSVNRRNQELIKELST 1157

  Fly   313 VHKDALDLSHLRGKEQVGFWTQLSVLLRRHLRSMSRDMFAVQMRLVMHVVVALLLGVVYWQIGGD 377
            ....:.|| :.|.|....|.||......:...|..|......:|.:|.||:.:|.|:::||.|..
plant  1158 PPPGSNDL-YFRTKYAQPFSTQTKACFWKMYWSNWRYPQYNAIRFLMTVVIGVLFGLLFWQTGTK 1221

  Fly   378 AQK---IVSNVSCLFFVILFVFAGNA---MPSILLCMQDSAVFIREYYNGWYSLGAYYLSKVLAD 436
            .:|   :.:....::..:||:.|.||   .|::.:   :..||.||...|.||...|.:|:|..:
plant  1222 IEKEQDLNNFFGAMYAAVLFLGATNAATVQPAVAI---ERTVFYREKAAGMYSAIPYAISQVAVE 1283

  Fly   437 LPLQLTCPTMFISIGYFMTGQPPEFQRFAMCWALCVMTAFIGHFIGVIAGSLFTMQLAIFLVPSA 501
            :........::..|.|.|.|......:|  .|....|.....:|      :|:.|.| :.|.|:.
plant  1284 IMYNTIQTGVYTLILYSMIGYDWTVVKF--FWFYYYMLTCFVYF------TLYGMML-VALTPNY 1339

  Fly   502 TIP------FL----LFSGFFIRLNELSWFLRPICDVSFFRYIFEGLMRAIYGYDRGELECYATS 556
            .|.      ||    |||||.|...::..:.|.....|...:...|::.:..| ||..: .:.|.
plant  1340 QIAGICLSFFLSFWNLFSGFLIPRPQIPIWWRWYYWASPVAWTLYGIITSQVG-DRDSI-VHITG 1402

  Fly   557 NFCYYRTAEQFLKDFQMEGNEFDWD----MAVLGIFLILLLLAFF 597
                  ..:..||.....|..||:|    :||:.|..||:.|..|
plant  1403 ------VGDMSLKTLLKNGFGFDYDFLPVVAVVHIAWILIFLFAF 1441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9664NP_722889.1 ABCG_EPDR 20..243 CDD:213180 81/240 (34%)
EcfA2 23..247 CDD:224047 81/241 (34%)
ABC2_membrane 338..539 CDD:279410 53/216 (25%)
YadH <388..547 CDD:223912 42/171 (25%)
ABCG34NP_181179.2 PLN03140 11..1453 CDD:215599 177/630 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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