DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9664 and ABCG32

DIOPT Version :9

Sequence 1:NP_722889.1 Gene:CG9664 / 33540 FlyBaseID:FBgn0031515 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_180259.1 Gene:ABCG32 / 817232 AraportID:AT2G26910 Length:1420 Species:Arabidopsis thaliana


Alignment Length:649 Identity:173/649 - (26%)
Similarity:297/649 - (45%) Gaps:111/649 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LELHFSQVSYSL--------KGATKGSTPIINEACGVFKSGRLTAILGPSGAGKSTLLNALAGFK 77
            |.|.||.::|.:        :|..:....::....|.|:.|.|||::|.|||||:||::.|||.|
plant   816 LSLSFSNINYYVDVPLGLKEQGILEDRLQLLVNITGAFRPGVLTALVGVSGAGKTTLMDVLAGRK 880

  Fly    78 LQG-VTGQFLLNGRPRDIMSFRKMSAYIAQNFVMLNLLTVEETLRVSTDLKMPSSTAAQEKQKII 141
            ..| :.|...::|.|:...:|.::|.|..||.|....|||.|:|..|..|::|:...::.::..:
plant   881 TGGTIEGDVYISGFPKRQETFARISGYCEQNDVHSPCLTVVESLLFSACLRLPADIDSETQRAFV 945

  Fly   142 DDIIDILQLQSCRRTL-----VKNLSGGEHKRLSIGIELVTNPPIMFFDEPTSGLDCVGSYQVIC 201
            .:::::::|.|....|     |..||..:.|||:|.:|||.||.|:|.||||||||...:..|:.
plant   946 HEVMELVELTSLSGALVGLPGVDGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMR 1010

  Fly   202 HLQRLAHDGRIVVCVVHQPGSRLFQLFDDVLVLAH-GEVLYAG----EQREMLPTF--------A 253
            .::.:.:.||.:||.:|||...:|:.||::|.:.. ||::|||    :..|::..|        .
plant  1011 TVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGQKSCELIKYFESIEGVQKI 1075

  Fly   254 QSGHICPQYYNPADFALEVCSQSSTTE-----------RCESLITQNKMM---HSTASNVVKLQV 304
            :.||      |||.:.|:|  .:||.|           |..:|..:||.:   .|..||:.| ::
plant  1076 KPGH------NPAAWMLDV--TASTEEHRLGVDFAEIYRNSNLCQRNKELIEVLSKPSNIAK-EI 1131

  Fly   305 DEETALIDVHKDALDLSHLRGKEQVGFWTQLSVLLRRHLRSMSRDMFAVQMRLVMHVVVALLLGV 369
            :..|                 :.....::|....|.:...|..|:.....:|....||::|:||.
plant  1132 EFPT-----------------RYSQSLYSQFVACLWKQNLSYWRNPQYTAVRFFYTVVISLMLGT 1179

  Fly   370 VYWQIGG--DAQKIVSN-VSCLFFVILFVFAGNAMPSILLCMQDSAVFIREYYNGWYSLGAYYLS 431
            :.|:.|.  |.|:.:.| :..::..:||:...||..:..:...:..|..||...|.||...:..:
plant  1180 ICWKFGSKRDTQQQLFNAMGSMYAAVLFIGITNATAAQPVVSIERFVSYRERAAGMYSALPFAFA 1244

  Fly   432 KVLADLPLQLTCPTMFISIGYFMTGQPPEFQRFAMCWALCVMTAFIGHFIGVIAGSLFTMQLAIF 496
            :|..:.|..|...|::.:|.|.|...  |:......|.|..|...|.:|       .|...:...
plant  1245 QVFIEFPYVLAQSTIYSTIFYAMAAF--EWSAVKFLWYLFFMYFSIMYF-------TFYGMMTTA 1300

  Fly   497 LVPSATI------PFL----LFSGFFIRLNEL----SWF--LRPICDVSFFRYIFEGLMRAIYGY 545
            :.|:..:      ||.    |||||.|....:    .|:  ..|:.      :...||:.:.||.
plant  1301 ITPNHNVASIIAAPFYMLWNLFSGFMIPYKRIPLWWRWYYWANPVA------WTLYGLLVSQYGD 1359

  Fly   546 DRGELECYATSNFCYYRTAEQFLKDFQMEGNEFDWDMAVLGIFLILLLLAFFVTLNAVIRRALR 609
            |...::   .|:..:....:|.|:|.....::|      ||:..| :::||.|..:.|...|::
plant  1360 DERSVK---LSDGIHQVMVKQLLEDVMGYKHDF------LGVSAI-MVVAFCVFFSLVFAFAIK 1413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9664NP_722889.1 ABCG_EPDR 20..243 CDD:213180 82/236 (35%)
EcfA2 23..247 CDD:224047 83/242 (34%)
ABC2_membrane 338..539 CDD:279410 50/219 (23%)
YadH <388..547 CDD:223912 39/174 (22%)
ABCG32NP_180259.1 PLN03140 3..1420 CDD:215599 173/649 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.