DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9664 and abcg2

DIOPT Version :9

Sequence 1:NP_722889.1 Gene:CG9664 / 33540 FlyBaseID:FBgn0031515 Length:609 Species:Drosophila melanogaster
Sequence 2:XP_012819987.2 Gene:abcg2 / 734088 XenbaseID:XB-GENE-991895 Length:682 Species:Xenopus tropicalis


Alignment Length:701 Identity:189/701 - (26%)
Similarity:330/701 - (47%) Gaps:129/701 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADNAVQAQP----------------------------NGLGPQK--QKALE---LHFSQVSYSL 32
            |.|.||:.||                            ||...:|  :|.|.   |.|..::|.:
 Frog     1 MYDPAVKYQPCSTTDTLDTINMTHELPQTVVQILDPTVNGEVKKKGRKKTLSGAVLSFYNINYKV 65

  Fly    33 KGATKG--------STPIINEACGVFKSGRLTAILGPSGAGKSTLLNALAGFK-LQGVTGQFLLN 88
            | ...|        ...|:|:..|:.:.| |.|||||:|:|||:||:.||..| ..|::||.|::
 Frog    66 K-VKSGLICCRKVTERVILNDVNGIMRPG-LNAILGPTGSGKSSLLDVLAARKDPNGLSGQVLVD 128

  Fly    89 GRPRDIMSFRKMSAYIAQNFVMLNLLTVEETLRVSTDLKMPSSTAAQEKQKIIDDIIDILQLQSC 153
            |.|:. .:|:.:|.|:.|:.|::..|::.|.|:.|..|::|.|...:||.:.|:.:|..|.|...
 Frog   129 GEPQP-SNFKCLSGYVVQDDVVMGTLSIRENLQFSAALRLPRSVKQKEKDERINQVIKELGLTKV 192

  Fly   154 RRT-----LVKNLSGGEHKRLSIGIELVTNPPIMFFDEPTSGLDCVGSYQVICHLQRLAHDGRIV 213
            ..:     .::.:||||.||.:||:||:|:|.|:|.||||:|||...:..|:..|:|::..|:.:
 Frog   193 ADSKVGTQFIRGVSGGERKRTNIGMELITDPGILFLDEPTTGLDASTANAVLLLLKRMSRQGKTI 257

  Fly   214 VCVVHQPGSRLFQLFDDVLVLAHGEVLYAGEQREMLPTFAQSGHICPQYYNPADFALEVCSQSST 278
            :..:|||...:|:|||.:.:||.|.:|:.|..|:.|..|...|:.|..:.|||||.|::.:..||
 Frog   258 IFSIHQPRYSIFRLFDSLTLLAGGRLLFHGPSRDALDYFTGLGYECESHNNPADFFLDIINGDST 322

  Fly   279 T---ERCESLITQN--KMMHSTASNVVKLQVDEETALIDVH---KDALDLSHLRGKEQVGFWT-- 333
            .   .:.|.:..:|  |.::...|..|...:.|:......:   |..|:...|..|.:..|:.  
 Frog   323 AVALNKLEDVELENEQKEVNDNGSKTVVENLSEQFCTTSYYLETKAELEKMSLGKKIKSNFFARQ 387

  Fly   334 ---------QLSVLLRRHLRSMSRDMFAVQMRLVMHVVVALLLGVVYWQIGGDAQKIVSNVSCLF 389
                     ||..:.:|..:::.|:..|...::::.:|:||::|.:::.:..|...|.:.|..||
 Frog   388 ITYNTSFLHQLKWVCKRSFKNLWRNPQASIAQVMVTLVLALIVGAIFFGVKEDVSGIQNRVGSLF 452

  Fly   390 FVI---LFVFAGNAMPSILLCMQDSAVFIREYYNGWYSLGAYYLSKVLADLPLQLTCPT-MFISI 450
            ||.   .|    :::.:|.|.:.:..:||.||.:|:|.|.||:.:|:..||....|.|: :|.|:
 Frog   453 FVTTNQCF----SSVSAIELFIVEKKIFIHEYISGYYRLSAYFFAKLFTDLLPMRTLPSIIFTSV 513

  Fly   451 GYFMTGQPPEFQR-----FAMCWALCVMTAFIGHFIGVIAGSLFTMQLAIFLVPSATIPFLLFSG 510
            .|||.|    |:.     |.|.:.|.::..........:|.....:.:|..|:....:..::|||
 Frog   514 IYFMIG----FKATAGAFFTMMFTLMMIAYTAASMALAVAAGQDVVAVANLLMTICFVFMIIFSG 574

  Fly   511 FFIRLNE-LSWFLRPICDVSFFRYIFEGLMRAIYGYDRGELECYATSNFCY-------------- 560
            ..:.|.. :.|       :|:.:|.  .:.|  ||....::..:...|||.              
 Frog   575 LLVNLTSVMDW-------ISWLKYF--SIPR--YGLTALQINEFTNLNFCNGLNTTIQGNPNCTG 628

  Fly   561 -----YRTAEQFLKDFQMEGNEFD-WDM--------AVLGIFLILLLLAFF 597
                 ..|.|::|   .::|.:|. |.:        .::.|||.:..|..:
 Frog   629 SSPFGTCTGEEYL---TVQGIDFSTWGLWQNHLALACMIAIFLTIAYLKLY 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9664NP_722889.1 ABCG_EPDR 20..243 CDD:213180 85/239 (36%)
EcfA2 23..247 CDD:224047 85/237 (36%)
ABC2_membrane 338..539 CDD:279410 51/210 (24%)
YadH <388..547 CDD:223912 44/168 (26%)
abcg2XP_012819987.2 3a01204 73..675 CDD:273361 173/625 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.