DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9664 and Abca14

DIOPT Version :9

Sequence 1:NP_722889.1 Gene:CG9664 / 33540 FlyBaseID:FBgn0031515 Length:609 Species:Drosophila melanogaster
Sequence 2:XP_017167760.1 Gene:Abca14 / 67928 MGIID:2388708 Length:1719 Species:Mus musculus


Alignment Length:447 Identity:101/447 - (22%)
Similarity:188/447 - (42%) Gaps:96/447 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADNAVQAQPNGLGPQKQKALELHFSQVSYSLKGATKGSTPIINEACGVFKSGRLTAILGPSGAG 65
            ::.:.::.:|.||    ...:.:......:.||.:|   ...:|:.......|::|.:||.:|||
Mouse   540 LSSDFMEPEPVGL----VAGIRIQHLYKEFILKNST---LMAVNDLSLNLYEGQITVLLGHNGAG 597

  Fly    66 KSTLLNALAGFKLQGVTGQFLLNGR--PRDIMSFRKMSAYIAQNFVMLNLLTVEETLRVSTDLK- 127
            |:|.|:.|.|..|. ..|:..::|.  ..|::..||......|:.::..:|||.|.|.....:| 
Mouse   598 KTTTLSILTGLYLP-TRGKVYISGYDISSDMVQIRKSLGLCPQDDLLFPMLTVSEHLHFYCVIKG 661

  Fly   128 MPSSTAAQEKQKIIDDIIDILQLQSCRRTLVKNLSGGEHKRLSIGIELVTNPPIMFFDEPTSGLD 192
            :|....::|..:::.. ..:|| ||  .|:.|:||||..::|||.|.|:.:..::..||||||:|
Mouse   662 IPLQNQSRETNRMLTS-FGLLQ-QS--NTMSKDLSGGMKRKLSIIIALIGDTKVVILDEPTSGMD 722

  Fly   193 CV---GSYQVICHLQR------LAHD----------------GRIVVC----------------- 215
            .|   .::.::.|.::      ..|.                |.:..|                 
Mouse   723 PVSRRATWDLLQHYKKDRTILLTTHHMDEADVLGDRIAILVMGILKCCGSSLFLKKLYGVGYHLV 787

  Fly   216 VVHQPGS---RLFQLFDDVLVLAHGEVLYAGEQREMLPTFAQSGHICPQYYNPADFALEVCSQSS 277
            :|..|.|   ::|||..:.:..|..|...|.|...:||  .:..|...:.:...:...|....|.
Mouse   788 IVKTPDSNDEKIFQLIKNYIPTAKMETNVAAELSFILP--KEHTHRFAELFTDLEEKQEELGISG 850

  Fly   278 TTERCESLITQNKMMHSTASNVVKLQVDEETA----LI--DVHKDALDLSHLRGKEQVGFWTQLS 336
            ..   .|:.|.:::... .||:..|:::.|.|    ::  ..::|..:::..|..|:.|:     
Mouse   851 FG---VSMTTMDEVFFK-VSNLEDLKLNTEIAPSASIVSQSSNEDNQNMNVPRNFERPGY----- 906

  Fly   337 VLLRRHLRS-----------------MSRDMFAVQMRLVMHVVVALLLGVVYWQIGG 376
              .||||.|                 :.|.||:.:...::.:.:..|||::|..|.|
Mouse   907 --SRRHLDSSFNAGWSLYIQQFRAMFIKRVMFSWRYWKLLLLQLLALLGLMYLLIKG 961

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9664NP_722889.1 ABCG_EPDR 20..243 CDD:213180 66/270 (24%)
EcfA2 23..247 CDD:224047 68/271 (25%)
ABC2_membrane 338..539 CDD:279410 14/56 (25%)
YadH <388..547 CDD:223912
Abca14XP_017167760.1 rim_protein <128..1709 CDD:130324 101/447 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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