DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9664 and Abcg8

DIOPT Version :9

Sequence 1:NP_722889.1 Gene:CG9664 / 33540 FlyBaseID:FBgn0031515 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_080456.1 Gene:Abcg8 / 67470 MGIID:1914720 Length:673 Species:Mus musculus


Alignment Length:644 Identity:168/644 - (26%)
Similarity:311/644 - (48%) Gaps:106/644 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QKALELHFSQVSYSLKGATKGSTPIINEACGVFKSGRLTAILGPSGAGKSTLLNALAGFKLQG-- 80
            |.:.||....:|:.:                  :||::.||:|.||.|:::||:.:.|....|  
Mouse    82 QDSCELGIRNLSFKV------------------RSGQMLAIIGSSGCGRASLLDVITGRGHGGKM 128

  Fly    81 VTGQFLLNGRPRDIMSFRKMSAYIAQNFVMLNLLTVEETLRVSTDLKMPSSTAAQEKQKIIDDII 145
            .:||..:||:|......||..|::.|:..:|..|||.|||.....:::|.:.:..::.|.::|:|
Mouse   129 KSGQIWINGQPSTPQLVRKCVAHVRQHDQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVI 193

  Fly   146 DILQLQSCRRTLVKN-----LSGGEHKRLSIGIELVTNPPIMFFDEPTSGLDCVGSYQVICHLQR 205
            ..|:|:.|..|.|.|     :||||.:|:|||::|:.||.|:..||||||||...::.::..|.|
Mouse   194 AELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVTTLSR 258

  Fly   206 LAHDGRIVVCVVHQPGSRLFQLFDDVLVLAHGEVLYAGEQREMLPTFAQSGHICPQYYNPADFAL 270
            ||...|:|:..:|||.|.:|:|||.||::..|..:|.|..::|:..|...||.||:|.|||||.:
Mouse   259 LAKGNRLVLISLHQPRSDIFRLFDLVLLMTSGTPIYLGAAQQMVQYFTSIGHPCPRYSNPADFYV 323

  Fly   271 EVCS--------QSSTTERCESLI----------------TQNKMMHSTASNVVKLQVDEETALI 311
            ::.|        :.:|.|:.:||.                .:.|.: :|:::.|.|.:.::|.. 
Mouse   324 DLTSIDRRSKEREVATVEKAQSLAALFLEKVQGFDDFLWKAEAKEL-NTSTHTVSLTLTQDTDC- 386

  Fly   312 DVHKDALDLSHLRGKEQVGFWTQLSVLLRRHLRSMSRDMFAVQMRLVMH----VVVALLLGVVYW 372
               ..|::|.        |...|.|.|:||.:.:..||:    ..|::|    .:::|::|.:|:
Mouse   387 ---GTAVELP--------GMIEQFSTLIRRQISNDFRDL----PTLLIHGSEACLMSLIIGFLYY 436

  Fly   373 QIGGDAQKIVSNVSCLFFVILFVFAGNAMP-SILL-----CMQDSAVFIREYYNGWYSLGAYYLS 431
            ..|......:...:.||.:      |..:| :::|     |..:.::...|..:|.|:.|.|:.:
Mouse   437 GHGAKQLSFMDTAALLFMI------GALIPFNVILDVVSKCHSERSMLYYELEDGLYTAGPYFFA 495

  Fly   432 KVLADLPLQLTCPTMFISIGYFMTGQPPEFQRFAMCWALCVMTAFIGHFIGVIAGSLF-TMQLAI 495
            |:|.:||.......::....|::|...|..:.|.:.:.|..:..|....:.:.|.::. |..::.
Mouse   496 KILGELPEHCAYVIIYAMPIYWLTNLRPVPELFLLHFLLVWLVVFCCRTMALAASAMLPTFHMSS 560

  Fly   496 FLVPSATIPFLLFSGFFIRLNEL----SWFLRPICDVSFFRYIFEGLMRAIYGYDRGELECYATS 556
            |...:....|.|.:||.|.|:.|    :|    |..:||.|:.|.|||:..:   .|.|......
Mouse   561 FFCNALYNSFYLTAGFMINLDNLWIVPAW----ISKLSFLRWCFSGLMQIQF---NGHLYTTQIG 618

  Fly   557 NFCYYRTAEQFLKDFQMEGNEFDWDMAVLGIFLILL------LLAFFVTLNAVIRRALR 609
            ||.:....:..:....:..:      .:..|:||::      |..::::|..:.:::::
Mouse   619 NFTFSILGDTMISAMDLNSH------PLYAIYLIVIGISYGFLFLYYLSLKLIKQKSIQ 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9664NP_722889.1 ABCG_EPDR 20..243 CDD:213180 79/229 (34%)
EcfA2 23..247 CDD:224047 79/230 (34%)
ABC2_membrane 338..539 CDD:279410 49/215 (23%)
YadH <388..547 CDD:223912 40/169 (24%)
Abcg8NP_080456.1 ABCG_White 71..296 CDD:213201 80/231 (35%)
3a01204 89..664 CDD:273361 165/628 (26%)
ABC2_membrane 402..606 CDD:279410 51/217 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3602
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.770

Return to query results.
Submit another query.