DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9664 and abcg2b

DIOPT Version :9

Sequence 1:NP_722889.1 Gene:CG9664 / 33540 FlyBaseID:FBgn0031515 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_001034155.1 Gene:abcg2b / 570453 ZFINID:ZDB-GENE-050517-36 Length:618 Species:Danio rerio


Alignment Length:609 Identity:185/609 - (30%)
Similarity:321/609 - (52%) Gaps:63/609 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LHFSQVSYSL---KGATKGSTP---IINEACGVFKSGRLTAILGPSGAGKSTLLNALAGFK-LQG 80
            |.:..:.|.:   :|......|   |:....|:.|:| |.||:|.:|:||::||:.:||.| .:|
Zfish    28 LTYQNIHYCIRESRGLCCKKAPERDILKNVSGIMKTG-LNAIMGATGSGKTSLLDVMAGRKDPRG 91

  Fly    81 V-TGQFLLNGR--PRDIMSFRKMSAYIAQNFVMLNLLTVEETLRVSTDLKMP-SSTAAQEKQKII 141
            : :||.|::.:  ..|:   |.||||:.|:.|::..|||.|.|..|.:|::| ...::.:|:|.:
Zfish    92 LRSGQVLVDNKLVTSDL---RLMSAYVVQDDVLMGTLTVRENLLFSGNLRLPREQFSSADKKKKV 153

  Fly   142 DDIIDILQLQSCRRT-----LVKNLSGGEHKRLSIGIELVTNPPIMFFDEPTSGLDCVGSYQVIC 201
            :.||:.|.|:.|..|     .::.:||||.||.|||:||:|:|.::|.||||:|||...:..:|.
Zfish   154 ESIIEELGLEDCADTKIGTEFIRGVSGGERKRCSIGMELITSPTLLFLDEPTTGLDSNTANSIIA 218

  Fly   202 HLQRLAHDGRIVVCVVHQPGSRLFQLFDDVLVLAHGEVLYAGEQREMLPTFAQSGHICPQYYNPA 266
            .|.||:..||.::..:|||...:|:|||.:.::..||.:|||...:.:..|...|:....:.|||
Zfish   219 LLHRLSRGGRTIIFSIHQPRYSIFRLFDYLTLMHKGETVYAGPAGKAIDYFQSLGYERDAFNNPA 283

  Fly   267 DFALEVCSQSSTTERCESLITQNKMMHSTASNVVKLQVDEETALIDVHKDALDLSHLRGKEQV-G 330
            ||.|::.:..:.|    |:.|:..:......:.....||||...|....|:|..:..:....| .
Zfish   284 DFFLDITNGETAT----SMPTEKSLAELYRESQFCTAVDEELKCITGPSDSLSEAKSKAPSYVTS 344

  Fly   331 FWTQLSVLLRRHLRSMSRDMFAVQMRLVMHVVVALLLGVVYWQIGGDAQKIVSN-VSCLFFVILF 394
            |..||.|:..|...::.|:......::.|:::.|||:|:||:|:.....:.:.| :...||:|:.
Zfish   345 FSYQLKVVCWRTGLNVVRNPQTSYAQIAMNILFALLIGLVYYQMPLTLPEALQNRIGAFFFLIIN 409

  Fly   395 VFAGNAMPSILLCMQDSAVFIREYYNGWYSLGAYYLSKVLAD-LPLQLTCPTMFISIGYFMTGQP 458
            :..|| :.::.|.:.:.|:|:.|...|:|....|:||||..| ||.::....:|.||.|:|.|..
Zfish   410 MVFGN-LSAVELFINERAIFVHENSGGYYRTSVYFLSKVFVDLLPNRIVPILIFSSISYYMMGLN 473

  Fly   459 PEFQRFAMCWALCV-MTAFIGHFIG-VIAGSLFTMQLAIFLVPSATIPF---LLFSGFFIRLNEL 518
            |.|..| :|:||.| :.:..|..:. :::.|:.|..:|..||   .:||   ::|.||.:.||.:
Zfish   474 PAFTSF-LCFALTVSLVSLAGVSLAFLVSASVSTFAMANILV---VLPFVFMMVFGGFLVNLNSM 534

  Fly   519 SWFLRPICDVSFFRYIFEGL----MRAIYGYD-----RGELECYATSNFCYYRTAEQFLKDFQME 574
            ..:|..:...|.|:|..:.:    |:.:..|.     .|||          |..::..  |:.:.
Zfish   535 LNWLSWLKWTSIFKYGLDAVTINEMKGLVLYSGNATLPGEL----------YLESQGI--DYSVW 587

  Fly   575 GNEFDW--DMAVLGIFLILLLLAF 596
            |   .|  ::|:|||.|:.:..|:
Zfish   588 G---FWQNEVALLGIVLVCMTFAY 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9664NP_722889.1 ABCG_EPDR 20..243 CDD:213180 85/235 (36%)
EcfA2 23..247 CDD:224047 87/239 (36%)
ABC2_membrane 338..539 CDD:279410 60/211 (28%)
YadH <388..547 CDD:223912 51/173 (29%)
abcg2bNP_001034155.1 P-loop_NTPase 39..260 CDD:304359 83/224 (37%)
3a01204 41..616 CDD:273361 183/596 (31%)
ABC2_membrane 354..557 CDD:279410 60/207 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.850

Return to query results.
Submit another query.