DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9664 and abca3b

DIOPT Version :9

Sequence 1:NP_722889.1 Gene:CG9664 / 33540 FlyBaseID:FBgn0031515 Length:609 Species:Drosophila melanogaster
Sequence 2:XP_009297489.1 Gene:abca3b / 564344 ZFINID:ZDB-GENE-050517-2 Length:1703 Species:Danio rerio


Alignment Length:857 Identity:175/857 - (20%)
Similarity:279/857 - (32%) Gaps:297/857 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VQAQPNGLGPQKQKALELHFSQVSYSLKGATKGSTPIINEACGVFKSGRLTAILGPSGAGKSTLL 70
            ::.:|.||      ...:...:::...|...|....:.:....:|: |::|.:||.:||||:|.|
Zfish   517 MEEEPAGL------VAGVKIKRLAKVFKVGNKSKEAVRDLTLNMFE-GQITVLLGHNGAGKTTTL 574

  Fly    71 NALAGFKLQGVTGQFLLNGRP--RDIMSFRKMSAYIAQNFVMLNLLTVEETLRVSTDLKMPSSTA 133
            :.|.|. ....:|:..:||..  :|:...|:......|:.|:.:.|||.|.|...|.||      
Zfish   575 SMLTGL-FPPSSGRAYINGYDICQDMALIRRSLGLCPQHDVLFDNLTVREHLLFYTQLK------ 632

  Fly   134 AQEKQKI---IDDIIDILQLQSCRRTLVKNLSGGEHKRLSIGIELVTNPPIMFFDEPTSGLDCVG 195
            ...::||   :|.||.||.|:..|....|.||||..::|||||.|:.:..::..||||||:| ..
Zfish   633 GYPREKIPGEVDRIIRILNLEDKRNAKCKTLSGGMKRKLSIGIALIGDSKVVMLDEPTSGMD-PS 696

  Fly   196 SYQVICHLQRLAHDGRIVVCVVHQPGSRLFQ-----LFDDVLVLAHGEVLYAGEQREMLPTFAQS 255
            :.:....|.:....||.::...|      |.     |.|.:.::|.||:...|....:...:...
Zfish   697 ARRATWDLLQGEKRGRTILLTTH------FMDEADLLGDRIAIMASGELQCCGSPLFLKNKYGAG 755

  Fly   256 GHI-------C--------PQYYNPADFALEVCS--------QSSTTERCESLITQNKM------ 291
            .|:       |        ...|.| |..||..:        ...:|.|.|.|..:.:|      
Zfish   756 YHMVIVKDAFCNVSEITRLVHMYVP-DATLESSAGAELSYILPKESTSRFELLFAELEMNRDELG 819

  Fly   292 ----------MHSTASNVVKLQVDEETALIDVHKDALDLSHLRG--------------------- 325
                      |......|.|| ||....:..:...||...|.|.                     
Zfish   820 IASYGASVTTMEEVFLRVGKL-VDSSLDIQAIQLPALQYQHERRSHDWTMDDSSSISGMTDVTDF 883

  Fly   326 --------------------------------KEQVGFWTQLSVLLRRHL-------------RS 345
                                            |..:..|....|::.:.|             ||
Zfish   884 TDSCTMISEDGSNIKLNTGARLYMQQFYAMFLKRALYSWRNWKVMVAQFLVPLIFTVLALVVARS 948

  Fly   346 MSRDMFAVQMRLVM------HVVVAL---------LLGVVY-WQIGGDAQKIVSNVSCLFFVIL- 393
            :.....:.|:||.:      ||.||:         ||..:| .|:.........|::.....:| 
Zfish   949 LPSSHSSPQLRLALKQYGQTHVPVAVEANAGPLASLLAEIYTTQLPSQNAIAAPNITDFSEYVLY 1013

  Fly   394 ---------------------------FVFAGNAMPSILLCMQDSAVF----------------- 414
                                       |...|...|:..|.:.|:|:|                 
Zfish  1014 NAQREGGAFNEHCVVGAAFRSSDVIGYFNNQGYHTPATALMLVDNALFKLLAGPNASIQTGNDPM 1078

  Fly   415 -----------IREYYNGWYSLGAYYLSKVLADLPLQLTCPTMFIS------------IGYFMTG 456
                       :.|...|:    |..::.:.....|..|...:.:|            .|.::| 
Zfish  1079 PRNVSETAQSQLSESQTGF----AIAINLMYGMASLASTFALLLVSERSVKSKHVQQVSGVYLT- 1138

  Fly   457 QPPEFQRFAMCWAL------CVM----------TAFI--GHFIGVI------------------- 484
               .|...|:.|.|      |::          .||:  .|.:.|:                   
Zfish  1139 ---NFWFSALLWDLINFLLPCLLMLVVFRVFSVKAFVAQNHLVDVLFLLLLYGWAVIPLMYLMSF 1200

  Fly   485 ----AGSLFTMQLAIFLVPSATIPFLLFSGFFI-RLNELSWFLRPICDVSFFRYIFEGL---MRA 541
                |.:.:| :|.||.:.|.|..||..:...| .||.|  .|..:.|..|.  ||...   |..
Zfish  1201 LFSTAATAYT-RLTIFNIISGTATFLAVTIMTIPELNLL--HLSHLLDKVFL--IFPNYCLGMSF 1260

  Fly   542 IYGYDRGELECYATSN-----FC-YYRTAEQFLKDFQMEGNEFDWDMAVLGIFLILLLL---AFF 597
            ...|...|:..:.||:     .| ||...      :||  |.|..:...:|.||:.|.|   .|.
Zfish  1261 TEFYQNYEMITFCTSSPLAKYICKYYNIT------YQM--NYFSMEEPGVGRFLVALSLQGVVFI 1317

  Fly   598 VTLNAVIRRALR 609
            :.|..:..|.:|
Zfish  1318 ILLFLIELRCIR 1329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9664NP_722889.1 ABCG_EPDR 20..243 CDD:213180 67/232 (29%)
EcfA2 23..247 CDD:224047 68/233 (29%)
ABC2_membrane 338..539 CDD:279410 58/342 (17%)
YadH <388..547 CDD:223912 45/271 (17%)
abca3bXP_009297489.1 AAA 1..>95 CDD:333001
AAA <122..1695 CDD:333001 175/857 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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