DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9664 and Abca17

DIOPT Version :9

Sequence 1:NP_722889.1 Gene:CG9664 / 33540 FlyBaseID:FBgn0031515 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_001026807.1 Gene:Abca17 / 287112 RGDID:1560494 Length:1773 Species:Rattus norvegicus


Alignment Length:310 Identity:81/310 - (26%)
Similarity:144/310 - (46%) Gaps:43/310 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VQAQPNGLGPQKQKALEL-HFSQVSYSLKGATKGSTPIINEACGVFKSGRLTAILGPSGAGKSTL 69
            :|.:|.|    ...|:|: |..:|.|:  |.:| ...:.:.:..::| |::|.:||.:||||:|:
  Rat   514 LQDEPAG----HINAIEIQHLYKVFYT--GRSK-CIAVKDLSMNLYK-GQITVLLGHNGAGKTTV 570

  Fly    70 LNALAGFKLQGVTGQFLLNG--RPRDIMSFRKMSAYIAQNFVMLNLLTVEETLRVSTDLKMPSST 132
            .:.|.|. :....|...::|  ..:|::..||...:..|:.::.:..||.:.|.....||..|..
  Rat   571 CSVLTGL-IPPSKGHAYIHGCEISKDMVRIRKNVGWCPQHDILFDNFTVTDHLYFYGQLKGLSHQ 634

  Fly   133 AAQEKQKIIDDIIDILQLQSCRRTLVKNLSGGEHKRLSIGIELVTNPPIMFFDEPTSGLDCVGSY 197
            ...||   |::::..|.|:..|.:..|.||||..::|:|||.|:....::..||||||:|. .|.
  Rat   635 DCHEK---IEEMLHTLGLEDKRNSRSKFLSGGMKRKLAIGIALIAGSKVLILDEPTSGMDS-SSR 695

  Fly   198 QVICHLQRLAHDGRIVVCVVHQPGSRLFQ-----LFDDVLVLAHGEVLYAGEQREMLPTFAQSGH 257
            :.|..|.:.....|.|:...|      |.     |.|.:.:||.||:...|     .|:|.:   
  Rat   696 RAIWDLLQQQKGDRTVLLTTH------FMDEADLLGDRIAILAKGELQCCG-----TPSFLK--- 746

  Fly   258 ICPQYYNPADFALEVCSQSSTTERCESLITQNKMMHSTASNVVKLQVDEE 307
               |.|....:...:.:....||:...:|     .|...:.:::.::.||
  Rat   747 ---QKYGAGYYMTIIKTPLCDTEKLAKVI-----YHHIPNAILESRIGEE 788

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9664NP_722889.1 ABCG_EPDR 20..243 CDD:213180 67/230 (29%)
EcfA2 23..247 CDD:224047 66/231 (29%)
ABC2_membrane 338..539 CDD:279410
YadH <388..547 CDD:223912
Abca17NP_001026807.1 ABC2_membrane_3 <262..464 CDD:289468
ABC_subfamily_A 525..746 CDD:213230 69/240 (29%)
drrA 543..834 CDD:130256 71/274 (26%)
ABC2_membrane_3 913..1255 CDD:289468
CcmA 1369..1682 CDD:224054
ABC_subfamily_A 1369..1590 CDD:213230
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1690..1773
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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