DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9664 and Abcg3

DIOPT Version :9

Sequence 1:NP_722889.1 Gene:CG9664 / 33540 FlyBaseID:FBgn0031515 Length:609 Species:Drosophila melanogaster
Sequence 2:XP_017176394.1 Gene:Abcg3 / 27405 MGIID:1351624 Length:683 Species:Mus musculus


Alignment Length:601 Identity:154/601 - (25%)
Similarity:278/601 - (46%) Gaps:103/601 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LHFSQVSYSLKGATKGSTPI---------INEACGVFKSGRLTAILGPSGAGKSTLLNALAGFK- 77
            |.|..:||  :...:...|:         ::...|:.|.| |.||:||....:|.||:.||..: 
Mouse   110 LSFHNISY--QETVQSGFPLRKKAYVIERLSNISGIMKPG-LNAIMGPQDGSRSLLLDVLAARRD 171

  Fly    78 LQGVTGQFLLNGRPRDIMSFRKMSAYIAQNFVMLNLLTVEETLRVSTDLKMPSSTAAQEKQKIID 142
            .:|::|..|:||:||. .:|:..|.|:.||.|:|..:||.:.|..|..|::|.:....||::.|:
Mouse   172 PRGLSGDILINGKPRP-ANFKCTSGYVPQNDVVLGTVTVRDNLEFSAALRLPVTITRDEKRRRIN 235

  Fly   143 DIIDILQLQSCRRTLVKNLSGGEHKRLSIGIELVTNPPIMFFDEPTSGLDCVGSYQVICHLQRLA 207
            :::::|.|.  :...:|..|....||.||.:||||..||:|.|:||:|||...:..||..|:|::
Mouse   236 EVLELLHLN--KEQNIKPRSKELRKRTSIAMELVTEHPILFLDDPTTGLDLRTTTDVILVLRRMS 298

  Fly   208 HDGRIVVCVVHQPGSRLFQLFDDVLVLAHGEVLYAGEQREMLPTFAQSGHICPQYYNPADFALEV 272
            ..||.::..::||...:|:.||.:.::|.|:|::.|..::.|..|..:|:....:.|||||.|:|
Mouse   299 KKGRTIIFSINQPQYSIFKFFDSLTLVASGKVMFHGPAQDALEYFRSAGYNYESHNNPADFFLDV 363

  Fly   273 CS-----------QSSTTERCESLITQNKMMHSTASNV-VKLQVDEETALIDVHKDALDLSHLRG 325
            .:           .....::.|.|..:...:....:|: .:..:..||..|        |..|.|
Mouse   364 INGGFSNILDTEEDGHEDDKYEELFERQYQVTGKLANMYAQSPLYSETRAI--------LDQLLG 420

  Fly   326 KEQV------------GFWTQLSVLLRRHLRSMSRDMFAVQMRLVMHVVVALLLGVVYWQIGGDA 378
            ::::            .|..||..::.:..::.....:...::.::.|::|..:|..:..:..|.
Mouse   421 EQKLERSSAVETTCVTPFCHQLKWIICQSFKNFKGFPWVTVIQAIITVILATAVGTAFRVLKNDC 485

  Fly   379 QKIVSNVSCLFFVILF-----VFAGNAMPSILLCMQDSAVFIREYYNGWYSLGAYYLSKVLADL- 437
            .::......|:.:.:|     |.||.      |.:.|...|:.|:.:|:|.:.:|:..|:||:| 
Mouse   486 IEVQMRAGLLYLLTIFQCITSVSAGE------LFVIDRVRFLHEHTSGYYRVSSYFFGKLLAELI 544

  Fly   438 PLQLTCPTMFISIGYFMTGQPPEFQRFAMCWALCVMTAFIGHFIGVIAGSLFTMQLAI------F 496
            |.:|...|:|..|.|.:.|.....:    |:...:.|      |.|:|.|..::.|:|      .
Mouse   545 PRRLLPSTVFSLITYVIAGVKMSMK----CFFTMICT------IMVLAYSASSLPLSIGAGENAV 599

  Fly   497 LVPS--ATIPFL---------LFSGFFIRLNELSWFLRPICDVSFFRYIFEGLMRAIYGYDRGEL 550
            .||:  .||.|:         |:||.|  |.:|||       :.:|.....|....::....|: 
Mouse   600 AVPTLLVTIYFVFMLFFSGLSLYSGSF--LPKLSW-------IQYFSIPHYGFRALLHNEFLGQ- 654

  Fly   551 ECYATSNFCYYRTAEQ 566
                  |||.....|:
Mouse   655 ------NFCPEHNTEE 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9664NP_722889.1 ABCG_EPDR 20..243 CDD:213180 76/229 (33%)
EcfA2 23..247 CDD:224047 77/233 (33%)
ABC2_membrane 338..539 CDD:279410 50/223 (22%)
YadH <388..547 CDD:223912 46/181 (25%)
Abcg3XP_017176394.1 3a01204 137..670 CDD:273361 149/572 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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