DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9664 and Abcg4

DIOPT Version :9

Sequence 1:NP_722889.1 Gene:CG9664 / 33540 FlyBaseID:FBgn0031515 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_620405.3 Gene:Abcg4 / 192663 MGIID:1890594 Length:646 Species:Mus musculus


Alignment Length:653 Identity:240/653 - (36%)
Similarity:363/653 - (55%) Gaps:71/653 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADNAVQAQPNGLGP--------------------------------------QKQKALELHFSQ 27
            ||:.|::|...||||                                      .|:.|:::.|.:
Mouse     1 MAEKALEAVGCGLGPGAVAMAVTLEDGAEPPVLTTHLKKVENHITEAQRFSHLPKRSAVDIEFVE 65

  Fly    28 VSYSLKGA----TKGSTPIINEACGVFKSGRLTAILGPSGAGKSTLLNALAGFKLQGVTGQFLLN 88
            :|||::..    .:|...::....|.|....|..|:|||||||||.:|.|||::..|:.||.|:|
Mouse    66 LSYSVREGPCWRKRGYKTLLKCLSGKFCRRELIGIMGPSGAGKSTFMNILAGYRESGMKGQILVN 130

  Fly    89 GRPRDIMSFRKMSAYIAQNFVMLNLLTVEETLRVSTDLKMPSSTAAQEKQKIIDDIIDILQLQSC 153
            ||||::.:|||||.||.|:.::|..|||.|.:.||.:||:  |...:.|::::.:|:..|.|.||
Mouse   131 GRPRELRTFRKMSCYIMQDDMLLPHLTVLEAMMVSANLKL--SEKQEVKKELVTEILTALGLMSC 193

  Fly   154 RRTLVKNLSGGEHKRLSIGIELVTNPPIMFFDEPTSGLDCVGSYQVICHLQRLAHDGRIVVCVVH 218
            ..|....||||:.|||:|.:|||.|||:|||||||||||....:||:..::.|||.||.|:|.:|
Mouse   194 SHTRTALLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAHGGRTVICTIH 258

  Fly   219 QPGSRLFQLFDDVLVLAHGEVLYAGEQREMLPTFAQSGHICPQYYNPADFALEVCSQSSTTERCE 283
            ||.::||::||.:.:|:.|:.::.|....::|.....|..||.|:|||||.:||.|....     
Mouse   259 QPSAKLFEMFDKLYILSQGQCIFKGVVTNLIPYLKGLGLHCPTYHNPADFIIEVASGEYG----- 318

  Fly   284 SLITQNKMMHSTASNVVKLQVDEETA----LIDVH-------KDALDLSHLRGKEQVGFWTQLSV 337
               ..|.|:.....|.:....:::::    .:..|       .|.:: ||......:   ||..:
Mouse   319 ---DLNPMLFRAVQNGLCTMAEKKSSPGKNELPAHCPTCPPELDPIE-SHTFATSTL---TQFCI 376

  Fly   338 LLRRHLRSMSRDMFAVQMRLVMHVVVALLLGVVYWQIGGDAQKIVSNVSCLFFVILFVFAGNAMP 402
            |.||...|:.||.....:|.:.||::.:|:|::|..||.||.|:.:|...|||.:||:.....||
Mouse   377 LFRRTFLSILRDTVLTHLRFMSHVLIGVLIGLLYLHIGDDASKVFNNTGFLFFSMLFLMFAALMP 441

  Fly   403 SILLCMQDSAVFIREYYNGWYSLGAYYLSKVLADLPLQLTCPTMFISIGYFMTGQPPEFQRFAMC 467
            ::|....:.|||:||:.|.||:|.||||:|.:||:|.|:.||.::.||.|:|||||.|..||.:.
Mouse   442 TVLTFPLEMAVFMREHLNYWYTLKAYYLAKTMADVPFQVVCPVVYCSIVYWMTGQPAETSRFLLF 506

  Fly   468 WALCVMTAFIGHFIGVIAGSLFT-MQLAIFLVPSATIPFLLFSGFFIRLNELSWFLRPICDVSFF 531
            .||.:.||.:...:|::.|:..| :|:|.|:.|...||.|||||||:....:..:|:....:|:.
Mouse   507 SALAIATALVAQSLGLLIGAASTSLQVATFVGPVTAIPVLLFSGFFVSFKTIPTYLQWSSYLSYV 571

  Fly   532 RYIFEGLMRAIYGYDRGELECYATSNFCYYRTAEQFLKDFQMEGNEFDWDMAVLGI-FLILLLLA 595
            ||.||||:..|||.:||.|.|  ....|.:|..:..|::..:|..:...|..|||| ||.|.|||
Mouse   572 RYGFEGLILTIYGMERGHLTC--LDEQCPFRDPQIILRELDVEEAKLYMDFLVLGIFFLALRLLA 634

  Fly   596 FFV 598
            :.|
Mouse   635 YLV 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9664NP_722889.1 ABCG_EPDR 20..243 CDD:213180 100/226 (44%)
EcfA2 23..247 CDD:224047 100/227 (44%)
ABC2_membrane 338..539 CDD:279410 84/201 (42%)
YadH <388..547 CDD:223912 70/159 (44%)
Abcg4NP_620405.3 3a01204 44..646 CDD:273361 232/610 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.900

Return to query results.
Submit another query.