DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment OtopLb and otop1

DIOPT Version :9

Sequence 1:NP_608758.1 Gene:OtopLb / 33539 FlyBaseID:FBgn0031514 Length:797 Species:Drosophila melanogaster
Sequence 2:NP_942098.1 Gene:otop1 / 322893 ZFINID:ZDB-GENE-030131-1613 Length:586 Species:Danio rerio


Alignment Length:691 Identity:144/691 - (20%)
Similarity:246/691 - (35%) Gaps:229/691 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 SGATSARNGSTAFFDNGAKSFQ------AKQQKDKNRRTGNDAISSALSATYCKLLVLLGVCL-- 260
            :.|:||.:.|::..:|  |.|.      .|:...||        :..|||.|...|:||||.:  
Zfish    18 AAASSASSSSSSDAEN--KLFSRLKVSLTKKYPQKN--------AELLSAQYGTNLLLLGVSVML 72

  Fly   261 -------PITE--VISDQIPTYVYQGFYVYLYVGSILFVIFLYISAFRNRSLFNALKDYHEKNSN 316
                   |:.|  ::|          |...|.:..:::::...|...|.||              
Zfish    73 ALAAQSGPVKEEHLLS----------FITVLMLVQLVWMLCYMIRRERERS-------------- 113

  Fly   317 VHLKHKVTHFGSFYLRVGAIAFAIGTMVYSGLEFGQFFELNGHPGCRDVFVAITPICRMVLCIAQ 381
             .:..:..|.|:.::|.|....|:.:::......|.|.   |:..|....:.:.||...:..|:|
Zfish   114 -PVPERDAHAGASWIRGGLTMLALLSLIMDAFRIGYFV---GYHSCISAALGVYPIVHALHTISQ 174

  Fly   382 VQFIFLNTTYMDMARHKVTSRFGLMHMVATNLCEWLYVLVEETKHEIFHISQHEVDPAHDLVIHN 446
            |.|::.:...: :.:::...|||::|.|.|||..|...::.||:|                    
Zfish   175 VHFLWFHIKDV-IKKYETFERFGVIHAVFTNLLLWCNGVMSETEH-------------------- 218

  Fly   447 SSMSRTDWAAVNESLHQHHHHHALNNTLVANVSSVIVNMTITPSPTPAAFSGCSRTTIMGALVQQ 511
                           ..|:|...|.....||:|:|.|.            ..|:.||.:..:...
Zfish   219 ---------------FMHNHRRRLIEMGYANLSTVDVQ------------PHCNCTTSVWLMFST 256

  Fly   512 LSPFLFPCTIEYSLICAVILFEMWKTVKSIPDIDKTRKNSVKPAAAKPAHHFSVDCSQSHKGLFF 576
            ...:|:|..|||.:..:.:||.|||.:....|....||..                |....||..
Zfish   257 SLYYLYPFNIEYHIFVSAMLFVMWKNIGRTLDRHSNRKRR----------------STGSTGLLL 305

  Fly   577 GILIIVMTIISMIMYFVLYTQPGYELVATQEVTLWETFMYFMCAAAVI--------TGMILMRDL 633
            |.|..::.:.|.:...|:|.   ..|..|:|:......|::....|::        ||:::.|  
Zfish   306 GPLGGLVALASSVSVLVVYL---IHLEKTEEMHEAAVSMFYYYGVAMMACMCVGSGTGLLVYR-- 365

  Fly   634 RYIKNTSDEHHSMD--------LDNLLLIVAQTGVYLYGMFSILGSYFAKWDTVPD-RVEGIIAE 689
                   .|:..||        ||..||:.:..|.:|....|::.|........|. ....:...
Zfish   366 -------MENRPMDTGSNPARTLDTELLLASSLGSWLMSWCSVVASVAEAGQKSPSFSWTSLTYS 423

  Fly   690 VFGVVQTSLQTMFILHSSHRR----------------------------------------CRGT 714
            :..|::..:|.:||:.|.:||                                        ..|:
Zfish   424 LLLVLEKCIQNLFIVESLYRRHSEEEEDAAAPQVFSVAVPPYDGILNHGYEAHDKHREAEPAAGS 488

  Fly   715 NQVRRK---------------PGRE------IITFLLVANIAIWFV----------NTLIKGRAV 748
            :.:.||               |||:      |..||.:.||::|.:          |.|      
Zfish   489 HALSRKQPDAPLPAGQRLDVTPGRKRQILKNICMFLFMCNISLWILPAFGCRPQYDNPL------ 547

  Fly   749 FRESHLEFFGVWGWTIITHISMPLAIFYRFHSTICLFEVWK 789
                ..|.||...||.:.::::||.:|||.||...||||::
Zfish   548 ----ENETFGTSVWTTVLNVAIPLNLFYRMHSVASLFEVFR 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLbNP_608758.1 Otopetrin 330..778 CDD:281218 107/535 (20%)
otop1NP_942098.1 Otopetrin 127..572 CDD:281218 106/533 (20%)
FYR-box 163..167 2/3 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 484..505 3/20 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 131 1.000 Inparanoid score I4607
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6364
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21522
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X278
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.070

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