DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment OtopLb and otpl-3

DIOPT Version :9

Sequence 1:NP_608758.1 Gene:OtopLb / 33539 FlyBaseID:FBgn0031514 Length:797 Species:Drosophila melanogaster
Sequence 2:NP_509170.1 Gene:otpl-3 / 259710 WormBaseID:WBGene00017449 Length:566 Species:Caenorhabditis elegans


Alignment Length:643 Identity:163/643 - (25%)
Similarity:272/643 - (42%) Gaps:138/643 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 STATINFQSGATSARNGSTAFFDNGAKSFQAKQQKDKNRRTGNDAISSA-----LSATYCKLLVL 255
            |.||..|.....::.|.||....|....|:..::    |...:||.|.|     .:..|...:|:
 Worm     2 SKATEEFDLIDRTSSNCSTIATPNSKVRFRYHEK----RYWLSDAWSRAYVFRLFTCFYAIFIVI 62

  Fly   256 LGVCLPITEVISDQIPTYVYQG--------FYVYLYVGSILFVIF-------LYISAFRNR-SLF 304
            .|:.:.::.:|:.:..|    |        ...:|..|||||:.:       ::.:..|.| || 
 Worm    63 AGIVIELSNIIAAEENT----GKISIKDLVLGTWLLGGSILFIAYCSYLVHDMHFTIKRQRISL- 122

  Fly   305 NALKDYHEKNSNVHLKHKV----THFGSFYLRVGAIAFAIGTMVYSGLEF-----GQFFELNGHP 360
                    :||.:......    |..||.|||:|.:.|.|..:||..|.|     |    .:.:.
 Worm   123 --------RNSGISATEPEVLANTSTGSLYLRLGCVVFGIIGVVYYLLIFVICLLG----WSSNE 175

  Fly   361 GCRDVFVAITPICRMVLCIAQVQFIFLNTTYMDMARHKVTSRFGLMHMVATNLCEWL-YVLVE-- 422
            |...|...:..:...|....|:.|::.|...:......: :||||||:..|||..|| |:|.|  
 Worm   176 GECSVISDVLNVMAAVFIFVQMWFVYCNGKIIFTGDGNL-ARFGLMHLTGTNLWMWLRYILYEEV 239

  Fly   423 ETKHEIFHISQHEVDPAHDLVIHNSSMSRTDWAAVNESLHQHHHHHALNNTLVANVSSVIVNMTI 487
            ||..||.|: ||            :::|:..           .|||.::......|..:      
 Worm   240 ETVKEIRHV-QH------------ANLSKAS-----------AHHHEVHEEACKGVLCI------ 274

  Fly   488 TPSPTPAAFSGCSRTTIMGALVQQLSPFLFPCTIEYSLICAVILFEMWKTVKSIPDID---KTRK 549
                    |:|             .:.|::.|.:|||||||.:.|..|..::.:....   |.:|
 Worm   275 --------FNG-------------YNEFMYTCVVEYSLICAGVAFVFWANLERLKREQMEKKMKK 318

  Fly   550 NSVKPAAAKPAHHFSVDCSQSHKGLFFGILIIVMTIISMIMYFVLYTQPGYELVATQEVTLW--- 611
            .|:          ..:|||::.:|||.|...|::|||: |..|..|:       :.:.|..|   
 Worm   319 RSI----------LKIDCSRTAEGLFAGFACIIVTIIA-IALFNAYS-------SDKNVAQWIFS 365

  Fly   612 -ETFMYFMCAA-AVITGMILMRDLRYIKNTSDEH--HSMDLDNLLLIVAQTGVYLYGMFSILGSY 672
             ....:|:.:. .|:.....||.|:::....||.  ::..||.:||:|...|..::.:..||.  
 Worm   366 CTNMSFFLVSTFLVVFAFWRMRYLKFLMEDDDEEDDNAELLDRILLVVGLIGELIFSIGGILS-- 428

  Fly   673 FAKWDTVPDRVEGIIAEVFGVVQTSLQTMFILHSSHRRCRGTNQ--VRRKPGREIITFLLVANIA 735
            |....|:...:......|..::|.:.|:..::.:|..|...:||  :|.|||:::||.||:.|.|
 Worm   429 FINNMTIGLPLIIFTTNVLRLIQVTFQSCLLMVASRLRIEESNQHMLRYKPGKQVITMLLMMNCA 493

  Fly   736 IWFVNTLIKGRAVFRESHLEFFGVWGWTIITHISMPLAIFYRFHSTICLFEVWKITYK 793
            .:.:|.....:|...:..:..:|.:.|.|:.....||.|||||||:.|..|:||.|::
 Worm   494 QFMMNVFEAQKAGINDEMIHMYGSYYWAIVVRGCSPLTIFYRFHSSACFAEIWKKTFR 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLbNP_608758.1 Otopetrin 330..778 CDD:281218 119/467 (25%)
otpl-3NP_509170.1 Otopetrin 144..536 CDD:281218 119/467 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4740
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 211 1.000 Inparanoid score I2365
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28576
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 1 1.000 - - FOG0001932
OrthoInspector 1 1.000 - - mtm4740
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21522
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X278
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.940

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