DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLb and otpl-8

DIOPT Version :9

Sequence 1:NP_608758.1 Gene:OtopLb / 33539 FlyBaseID:FBgn0031514 Length:797 Species:Drosophila melanogaster
Sequence 2:NP_510045.2 Gene:otpl-8 / 186752 WormBaseID:WBGene00010403 Length:619 Species:Caenorhabditis elegans


Alignment Length:624 Identity:171/624 - (27%)
Similarity:271/624 - (43%) Gaps:122/624 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 DKNRRTGNDAISSALSAT-------------------YCKLLV-LLGVCLPITEVISDQIPTY-- 273
            |...:.|:|:.|...|.|                   :.:|:. |..:.|.|..::.:..||:  
 Worm    27 DDMEKGGSDSDSLPSSPTHHHELYRRPWIHEPRATNFFVRLITSLYALILTIISLVVEVSPTWRT 91

  Fly   274 ----VYQGFYVYLYVGSILFVIFLYISAF---RNRSLFNALKDYH-EKNSNV----HLKHKVTHF 326
                ....||:.:|...|||..:.||...   ....|.:.|:.|. .|||.|    ..:|.....
 Worm    92 DMWLAETIFYISMYGVGILFFAYCYIFIIYPGPYNQLISVLRKYKIIKNSEVWFIMQSQHNGEGA 156

  Fly   327 GSFYLRVGAIAFAIGTMVYSGLEFGQFFELNGHPGCRDVFVAITPICRMVLCIAQVQFIFLNTTY 391
            |:.|||:||:.|....:|..|||.....|   :..|:.|.:| ..|..:|....|:.|||.|:..
 Worm   157 GTLYLRLGALFFGSVGIVLFGLELFLCIE---NVACKKVAIA-KMIVAIVFTFIQMHFIFCNSKI 217

  Fly   392 MDMARHKVTSRFGLMHMVATNLCEWL-YVLV-EETK-HEIFHISQHEVDPAHDLVIHNSSMSRTD 453
            ...:..|:.: ||:||:::.||..|. :||. :|.| |:...:.|       ....:.||.|   
 Worm   218 TVNSSRKIVA-FGMMHLISVNLWTWFRFVLAKQEAKAHKKAQLKQ-------TFRKYYSSSS--- 271

  Fly   454 WAAVNESLHQHHHHHALNNTLVANVSSVIVNMTITPSPTPAAFSGCSRTTIMGALVQQL------ 512
             ::.:|.:|:              :.|.::|.|:..:|.         |..|..:..:|      
 Worm   272 -SSSSEEIHE--------------LISAVLNSTLNNTPA---------TKTMEPVASRLFALEHF 312

  Fly   513 ---SPFLFPCTIEYSLICAVILFEMWKTVKSIPDIDKTRKNSVKPAAAKPAHHFSVDCSQSHKGL 574
               :.||..|.:|||||.|.|:|.:||::        .:.|..:..:.|......:|||.|..||
 Worm   313 GDVATFLTTCIVEYSLIGAAIMFILWKSI--------GQNNHQQSNSGKRKVKMRIDCSSSSTGL 369

  Fly   575 FFGILIIVMTIISMIMYFV---LYTQPGYELVATQEVTLWETFMYFMCAAAVITGMILMRDLRYI 636
            |.||:.::.:::||.||.:   |....|.:||    ..:.:..::.:...|.|.|:..||.|:|.
 Worm   370 FAGIIFLIGSLVSMGMYTIFESLRNSSGAQLV----FGIVDLSLFSIALGACIIGLWRMRHLQYR 430

  Fly   637 KNTSDEHHSMDLDNLLLIVAQTGVYLYGMFSILGSYFAKWDTVPD-RVEGIIAEVFGV--VQTSL 698
            .:.    |...:|.:|||:...|..||....|  ..|.......| .|..:.|.||.:  :|..:
 Worm   431 LHA----HGEVIDEILLIIGLIGEILYCAVGI--DVFITCRRSADLTVSALPAFVFVIRMIQVVV 489

  Fly   699 QTMFILHSSHRRCRGTNQVRRKPGREIITFLLVANIAIWFVNTLIKGRAVFRESHLEFFG----- 758
            |..|||.:|..||.....::.|||:||||||||:|:.::..:|.        |.....||     
 Worm   490 QAAFILTTSRLRCLSKYSMKYKPGKEIITFLLVSNVTLFVFHTF--------EGMKSSFGFSSKA 546

  Fly   759 VWGWTIITHISMPLAIFYRFHSTICLFEVWKITYKAKAH 797
            ...:..|.:...||.:||||||:.||.|:||.||..|::
 Worm   547 ATQYNYIIYAVGPLLVFYRFHSSACLAEIWKHTYSTKSN 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLbNP_608758.1 Otopetrin 330..778 CDD:281218 130/470 (28%)
otpl-8NP_510045.2 Otopetrin 160..566 CDD:281218 130/470 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I2171
eggNOG 1 0.900 - - E1_KOG4740
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28576
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 1 1.000 - - FOG0001932
OrthoInspector 1 1.000 - - mtm4740
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21522
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X278
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.890

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