DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLb and otpl-6

DIOPT Version :10

Sequence 1:NP_608758.1 Gene:OtopLb / 33539 FlyBaseID:FBgn0031514 Length:797 Species:Drosophila melanogaster
Sequence 2:NP_505195.1 Gene:otpl-6 / 185807 WormBaseID:WBGene00018479 Length:581 Species:Caenorhabditis elegans


Alignment Length:635 Identity:152/635 - (23%)
Similarity:273/635 - (42%) Gaps:109/635 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 NLQGTASGSTATINFQSGATSARNGSTAFFDNGAKSFQAKQQKDKNRRTGNDAISSALSATYCKL 252
            :::.|:|..|...::.|  |...|......:..|:||..|                :|:|.|..:
 Worm    12 SIESTSSDVTVLTDYSS--TIPENLPAWTKNTKAQSFGLK----------------SLTALYTLI 58

  Fly   253 LVLLGVCLPITEVISDQIPTYVYQGFYVYLYVGSILFVIFLYISAFRNRSLFNALKDYHEKNS-- 315
            |.::...:.|:.....:.....|..|.|.:|..:||:.|:|| :......:||.:..|.|:..  
 Worm    59 LTIVAFIIEISPTWQSESMNIEYTIFCVLMYSIAILYFIYLY-AYILYPIVFNTILLYLERMRVL 122

  Fly   316 NVHLKHKVTH---------FGSFYLRVGAIAF-AIGTMVYSGLEFGQFFELNGHPGCRDVFVAIT 370
            |||...:...         .|:.|||:|.:.| .:|::::....|..||....|    :::| :.
 Worm   123 NVHTVKRWVQPEPVFTGEGAGTLYLRLGTVLFGTLGSVLWGCEIFLCFFTETRH----NIYV-VK 182

  Fly   371 PICRMVLCIAQVQFIFLNTTYMDMARHKVTSRFGLMHMVATNLCEW----LYVLVEETKHEIFHI 431
            .|...:....|:.|:..|:. :|:.::...:.||:||.||.||..|    |...|.::..:...:
 Worm   183 YILAFLFTYLQMHFLCCNSK-IDLPKNNFLASFGMMHCVAVNLWVWFSLCLAKAVYKSDKKTLKL 246

  Fly   432 SQHEVDPAHDLVIHNSSMSRTDWAAVNESLHQHHHHHALNNTLVANVSSVIVNMTITPSPTPAAF 496
            .:.|..      ....:|:.|:               |:..|:...::|::      .|.:.:.|
 Worm   247 QKAEEK------YKKKNMTITE---------------AVAETITTTIASIV------SSESSSGF 284

  Fly   497 SGCSRTTIMGALVQQLSPFLFPCTIEYSLICAVILFEMWKTVKSIPDIDKTRKNSVKPAAAKPAH 561
            ....:.......:...:.||....:|:|||.|.:.|.:||........|..:|            
 Worm   285 RADEKQLRSLYKLGSAANFLLTTMVEFSLIAAAVYFIVWKHEGEQTPQDARKK------------ 337

  Fly   562 HFSVDCSQSHKGLFFGILIIVMTIISMIMYFVLYTQPGYELVATQEVTLWETFMYFMCAAAVITG 626
            |...||..:..|:|..|::::.:.||:.|::: |........|.:.:.:.||.::.:|..||...
 Worm   338 HVRFDCKSTSVGIFAAIVLLIGSFISIAMHYI-YNNSDMPRTADEVIGIAETVLFCVCLLAVFGA 401

  Fly   627 MILMRDLRYIKNTSDEHHSMDLDNLLLIVAQTGVYLY---GMFSILGSYFAKWDTVPDRVEG--- 685
            .|.||.|:|..:.    |...:|.:||||...|..:|   |:...|..          |:|.   
 Worm   402 FIRMRKLQYRLHA----HGQVVDEILLIVGLAGEIVYCSTGLDLYLNG----------RLENTPG 452

  Fly   686 -----IIAEVFGVVQTSLQTMFILHSSHRRCRGTNQVRRKPGREIITFLLVANIAIWFVNTLIKG 745
                 ::|.|..:||..:|::|||.:|..|....:.:..:||::|:|||:|.||.::..:|....
 Worm   453 TSCLTVVAFVMRIVQVVVQSVFILVASRLRSLSASNISNQPGKQIVTFLVVCNINLFIYHTFETI 517

  Fly   746 RAVFRESHLEFFGVWGWTIITHISMPLAIFYRFHSTICLFEVWKITYKAK 795
            .:.|...| :...|  ::.:.:||.||.:||||||:.||.|:||..|..|
 Worm   518 ESNFGFPH-KMSSV--YSALLNISSPLVVFYRFHSSACLAEIWKHAYSKK 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLbNP_608758.1 Otopetrin 330..778 CDD:460840 109/463 (24%)
otpl-6NP_505195.1 Otopetrin 146..547 CDD:460840 109/463 (24%)

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