DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLb and otpl-5

DIOPT Version :10

Sequence 1:NP_608758.1 Gene:OtopLb / 33539 FlyBaseID:FBgn0031514 Length:797 Species:Drosophila melanogaster
Sequence 2:NP_505196.2 Gene:otpl-5 / 185806 WormBaseID:WBGene00018478 Length:572 Species:Caenorhabditis elegans


Alignment Length:621 Identity:153/621 - (24%)
Similarity:273/621 - (43%) Gaps:103/621 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 INFQSGATSARNGSTAFFDNGAKSFQAKQQKDKNRRTGNDAISSALSATYCKLLVLLGVCLPITE 264
            ::.:|.:||....::    :|..|.....|..||....|..: :.::|.|..:|:::...:.|:.
 Worm    15 VSMESTSTSVAMSTS----DGFSSHDDISQWTKNTDAKNFCV-NLMTAIYTLILIMVAFVIEISP 74

  Fly   265 VISDQIPTYVYQGFYVYLYVGSILFVIFLYISAFRNRSLFNALKDYHEKNSNVH---LKHKVTH- 325
            ....:.....|..|.|.:|..::.:.::||:... ..::.|:...|..|.:...   |...|.: 
 Worm    75 TWRSEKMWLEYSIFCVLMYAVAVAYFLYLYLFVL-YPNVINSCIYYLFKKATPRRWLLDEPVFNG 138

  Fly   326 --FGSFYLRVGAIAF-AIGTMVYSGLEFGQFFELNGHPGCRDVFVAITPICRMVLCIAQVQFIFL 387
              .|:.||||||:.| ::|::::.......||:...|    .::| :..|..::....|:.|||.
 Worm   139 EGAGTMYLRVGALFFGSMGSVLWGTEILLCFFDNQRH----GIYV-VKYILAVIFTFMQMHFIFS 198

  Fly   388 NTTYMDMARHKVTSRFGLMHMVATNLCEWLYVLVEETKHEIFHISQHEVDPAHDLVIHNSSMSRT 452
            |:. :.:.|..:.::|||||.||.||..||.:.:  .|..|.| ::.|:                
 Worm   199 NSK-ISLKRSNIIAKFGLMHSVAVNLWNWLSICL--IKSSIKH-AKKEI---------------- 243

  Fly   453 DWAAVNESLHQHHHHHALNNTLVANVSSVIVNMTITPSPTPAAFSGCSRTTIMGALVQQL----- 512
                      ::.:..:.|.|....::.:..:.|               |...|...:||     
 Worm   244 ----------KYTYEGSDNETKTEILTEMSYDFT---------------TDSFGPHDKQLRAIIK 283

  Fly   513 ----SPFLFPCTIEYSLICAVILFEMWKTVKSIPDIDKTRKNSVKPAAAKPAHHFSVDCSQSHKG 573
                |..|..|.:|:|||.|||.|.:||...|         ||.:....|...||..|||.:..|
 Worm   284 LGSSSSILLTCLVEFSLIAAVICFIIWKNDDS---------NSGEALKKKKKRHFRFDCSGTTVG 339

  Fly   574 LFFGILIIVMTIISMIMYFVLYTQPGYELVATQEVTLWETFMYFMCAAAVITGMILMRDLRYIKN 638
            :|..:.:.:::.:::.|:.:| ::...:..|...|...:.|::.:...|.|.....||.|:|..:
 Worm   340 IFLAVAVHIISAVAVGMHGIL-SKSNRDSAANLLVGYTDVFLFVVALLACILAFFQMRKLQYRLH 403

  Fly   639 TSDEHHSMDLDNLLLIVAQTGVYLY---GMFSILGSYFAKWDTVPDRVEGIIAEVFGVVQTSLQT 700
            .    |...:|.:||||...|..:|   ||...:.....|   .|.....|::....:.:..:||
 Worm   404 A----HGEVIDEILLIVGLAGECVYSCAGMDLYINDKMIK---EPASYITIVSFTLRITEVLVQT 461

  Fly   701 MFILHSSHRRCRGTNQVRRKPGREIITFLLVANIAIWFVNTLIKGRAVFRESHLEF-FGVW---G 761
            :|||.::..||........:||:::||||||.||.::..:|       |..:.|.| |.:.   .
 Worm   462 IFILIATRMRCYTQTNCYTEPGKQVITFLLVCNINLFIYHT-------FETTELNFGFPIKLPDS 519

  Fly   762 WTIITHISMPLAIFYRFHSTICLFEVWKITYKAKAH 797
            ::.:.:|:.|:.:||||||:.||.|:||.||..|.|
 Worm   520 YSAMLNIASPIVVFYRFHSSACLAEIWKHTYSRKNH 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLbNP_608758.1 Otopetrin 330..778 CDD:460840 115/464 (25%)
otpl-5NP_505196.2 Otopetrin 145..536 CDD:460840 115/464 (25%)

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