DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment OtopLb and LOC100496487

DIOPT Version :10

Sequence 1:NP_608758.1 Gene:OtopLb / 33539 FlyBaseID:FBgn0031514 Length:797 Species:Drosophila melanogaster
Sequence 2:XP_017953313.2 Gene:LOC100496487 / 100496487 XenbaseID:XB-GENE-29083191 Length:655 Species:Xenopus tropicalis


Alignment Length:774 Identity:163/774 - (21%)
Similarity:295/774 - (38%) Gaps:205/774 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 GHHSIPV-MSPHPISPLAK-SQTNLDLVEHGSQRQALLPLPTVGMHHEDSACTLQVSRRPSLLLQ 160
            ||....| .:|..:..:.: |:.:||.....|..|....:|.......:.|..:..:.:..:.:.
 Frog     7 GHEGPEVPYAPSEVMEMPQISKKDLDAPHTNSDDQEEANMPNREQEMPNKALEMPPTAKEGMNVP 71

  Fly   161 EILTQ-----RPPLFGRRDGNGFLSPRTAKNGNLQGTASGSTATINFQSGATSARNGSTAFFDNG 220
            .|..:     :||.      .|.|....|:..|.:  :|.:...::.|:..|::.:|.:..:..|
 Frog    72 HINNKDSDMSQPPY------EGALPYLPAQVMNPE--SSEAQMDLSLQNQTTASPSGHSEVWKKG 128

  Fly   221 AKSFQAKQQKDKNRRTGNDAISSALSATYCKLLVLLG----VCLPITEVISDQIPTYVYQGFYVY 281
            .:...|..           ||:.||   :..:||..|    |.:...||::          |.|.
 Frog   129 GRLLSALM-----------AINIAL---FGSVLVSSGSLEHVVVQDKEVLA----------FLVV 169

  Fly   282 LYVGSILFVIF-LYISAFRNRSLFNALKDYHEKNSNVHLKHKVTHFGSFYLRVGAIAFAIGTMVY 345
            |.:.|:.::|| .|.|..:|..|:                 |.:|.|..:||.|.:.|.|.::|.
 Frog   170 LMLLSVFWMIFQFYFSCQKNAVLY-----------------KDSHAGPVWLRGGLVFFGICSLVM 217

  Fly   346 SGLEFGQFFELNGHPGCRDVFVAITPICRMVLCIAQVQFIFLNTTYMDMARHKVTSRFGLMHMVA 410
            ...:.|.:.   .:..|......|.|:.:....|.|..|:::::.:. :..|...||:|||.::.
 Frog   218 DVFKIGYYI---SYIDCESPIKLIHPMVQSAFIIMQTYFLWVSSKHC-VQIHTNISRYGLMLILI 278

  Fly   411 TNLCEWLYVLVEETKHEIFHISQHEVDPAHDLVIHNSSMSRTDWAAVNESLHQHHHHHALNNTLV 475
            |||..|:..:.:|:.|:     ..:::..|. ::|:|.....|...|. ..|:|           
 Frog   279 TNLSIWMAAVTDESVHQ-----TRDLEDDHK-IVHSSPAGSHDHKEVG-GAHEH----------- 325

  Fly   476 ANVSSVIVNMTITPSPTPAAFSGCSRTTIMGALVQQLSPFLFPCTIEYSLICAVILFEMWKTV-K 539
                                  .|..:..:..:.|....:|:|..|||||..:.:.:.|||.| :
 Frog   326 ----------------------TCQCSNHLCHIFQTGYYYLYPFNIEYSLFASAMTYVMWKNVGR 368

  Fly   540 SIPDIDKTRKNSVKPAAAKPAHHFSVDCSQSHKGLFFGILI----IVMTIISMIMYFVLYTQPGY 600
            .:.|              :.|||..:......|.:|.|.||    ::..::.:::|.|....|. 
 Frog   369 EMDD--------------QVAHHSRLSLCFYFKNMFAGFLIGGAVLLCGVVVLVIYKVKINLPD- 418

  Fly   601 ELVATQEVTLWETFMYF---------MCAAAVITGMILMRDLRYIKNTSDEHH--SMDLDNLLLI 654
                    .|:...:.|         :.:...:.|.|:   .|:.|...|.|.  :..||..||:
 Frog   419 --------KLYRAHILFYSFNILALALMSLGSLAGSII---YRFDKRHMDAHKNPTRTLDVTLLL 472

  Fly   655 VAQTGVYLYGMFSILGSYFAKWDTVPDRV---EGIIAEVFGVVQTSLQTMFILHSSHRRC----- 711
            .|..|.|....:||:    |...|.|..:   ..::..:..:||.:||..||:...||..     
 Frog   473 GAALGQYCISYYSIV----AMVATSPGELINALNLVYSILMIVQLTLQNTFIIEGLHREPFQDAA 533

  Fly   712 ----RG---TNQ-----------------------------------VRRKPGREIITFLLVANI 734
                :|   .|:                                   ::|:..:||..|||:.||
 Frog   534 PQPEKGLIFANEAVAPSLAHNETPGFSAPAPEFPAKPKQSITEPPWNLKRRMVQEISLFLLLCNI 598

  Fly   735 AIWFVNTLIKGRAVFRESHLE--FFGVWGWTIITHISMPLAIFYRFHSTICLFEVWKIT 791
            .:|.:...  |.....:::||  |:|::.|||||:|.:|..||||.|:...|.||::::
 Frog   599 ILWLMPAF--GARPQLKNNLERNFYGLYVWTIITNICLPFGIFYRMHAAASLLEVFRMS 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLbNP_608758.1 Otopetrin 330..778 CDD:460840 111/515 (22%)
LOC100496487XP_017953313.2 Otopetrin 203..641 CDD:460840 110/513 (21%)

Return to query results.
Submit another query.