DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLb and otop1

DIOPT Version :9

Sequence 1:NP_608758.1 Gene:OtopLb / 33539 FlyBaseID:FBgn0031514 Length:797 Species:Drosophila melanogaster
Sequence 2:XP_012811170.1 Gene:otop1 / 100495027 XenbaseID:XB-GENE-876999 Length:589 Species:Xenopus tropicalis


Alignment Length:632 Identity:133/632 - (21%)
Similarity:240/632 - (37%) Gaps:190/632 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 EVISDQIPTYVYQGFYVYLYVGSILFVIFLYISAFRNRSLFNALKD-------------YHEKNS 315
            |::|.|      .||.::|....::|...::.....:|.|.:.|..             :..::.
 Frog    38 EILSSQ------YGFNIFLAGLLLMFAWAIHAVGITDRDLLSYLITLMLIQMIWMLWYIFRSQSI 96

  Fly   316 NVHLKHKVTHFGSFYLRVGAIAFAIGTMVYSGLEFGQFFELNGHPGCRDVFVAITPICRMVLCIA 380
            ...:..|.|..|:.:||.|...||:.|::....:.|.:.   |:..|..:...|.|:...:..:.
 Frog    97 RRSIIEKDTDAGARWLRCGITLFAVITLILDSFKIGYYI---GYSECLSITEGIFPVTHTIHTLL 158

  Fly   381 QVQFIFLNTTYMDMARHKVTSRFGLMHMVATNLCEWLYVLVEETKHEIFHISQHEVDPAHDLVIH 445
            ||.|::.:...: :...|...||||:|.|.|||..|...::.|:|||   :::|: :....|...
 Frog   159 QVYFLWFHAKDI-IQSFKTLERFGLIHAVFTNLLLWANGILTESKHE---LNEHK-ERLITLGFS 218

  Fly   446 NSSMSRTDWAAVNESLHQHHHHHALNNTLVANVSSVIVNMTITPSPTPAAFSGCSRTTIMGALVQ 510
            |.:|.                ||                   ||.        |:.|:.:.::..
 Frog   219 NITMD----------------HH-------------------TPE--------CNCTSSVCSIFS 240

  Fly   511 QLSPFLFPCTIEYSLICAVILFEMWKTVKSIPDIDKTRKNSVKPAAAKPAHHFSVDCSQSHKGLF 575
            |...:|:|.||||.::.:.:|:.:||      :|.:|.|:..:.......|..::       |..
 Frog   241 QGIYYLYPFTIEYHILASTMLYVLWK------NIGRTVKHHQQQKIHFKFHGITI-------GTI 292

  Fly   576 FGILIIVMTIISMIMYFVLYTQPGYELVATQEVTLWETFMY------FMCAAAVITGMILMRDLR 634
            .|::::..|:..:::|.:   |.| ...:..|:.|...::|      .||.:|:| |:|:.|   
 Frog   293 LGLIVLTTTVAVLVVYLI---QIG-RSKSKSELALNMFYLYAITVLTLMCTSAII-GLIIYR--- 349

  Fly   635 YIKNTS---DEHHSMDLDNLLLIVAQTGVYLYGMFSILGSYFAKWDTVPDRV-EGIIAEVFGVVQ 695
             |:|.|   .|..:..||:.||:.:..|.:|....|||....|  :|.||.. ..:...:..:::
 Frog   350 -IENKSLDDSESPAKKLDSDLLVGSACGSWLISWGSILAIICA--ETHPDYTWYNLPYSILVIIE 411

  Fly   696 TSLQTMFILHSSHRR-----------------CRGT----------------------------- 714
            ..:|.:||:...||:                 .|.|                             
 Frog   412 KYIQNLFIIECIHRKEEEPTDDHSVERIFSVSARSTISLASSSYDVFSDSVTICNKEFPYISNSE 476

  Fly   715 -----------------NQVR-------------------RKPGREIITFLLVANIAIWFVNTLI 743
                             |.:|                   |:..:.|..||.:.||::|..... 
 Frog   477 VPIGEDCAEEQRNQDNNNSIRLTPCKVSIHATRPAKLNKKRRVLKNIAAFLFLCNISLWIPPAF- 540

  Fly   744 KGRAVFRESHLE--FFGVWGWTIITHISMPLAIFYRFHSTICLFEVW 788
             |.....::.||  .||...|..:.:::||.:||||.||...||||:
 Frog   541 -GCRPQYDNGLEEIVFGFEPWITVVNLAMPFSIFYRMHSASSLFEVY 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLbNP_608758.1 Otopetrin 330..778 CDD:281218 113/541 (21%)
otop1XP_012811170.1 Otopetrin 112..435 CDD:367383 91/397 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 169 1.000 Inparanoid score I4017
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9424
Panther 1 1.100 - - O PTHR21522
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X278
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.070

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