DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLb and otop3

DIOPT Version :9

Sequence 1:NP_608758.1 Gene:OtopLb / 33539 FlyBaseID:FBgn0031514 Length:797 Species:Drosophila melanogaster
Sequence 2:NP_001106584.1 Gene:otop3 / 100127796 XenbaseID:XB-GENE-993899 Length:681 Species:Xenopus tropicalis


Alignment Length:754 Identity:157/754 - (20%)
Similarity:256/754 - (33%) Gaps:254/754 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 RRDGNGFLSPRTAKNGNLQGTA----SGSTATINFQSGATSA--RNGSTAFFDNGAKSFQAKQQK 230
            ||...|...|......::|||.    :|..||...|.....|  .|...::.....:......|:
 Frog    42 RRGDIGQREPAAHPASHIQGTMASENTGEQATCKDQYMDLDAPGNNLEHSWLHRHCEIPTTLHQR 106

  Fly   231 DKNRRTGNDAISSALSATYCKLLVLLGVCLPITEVISDQ-IPTYVYQGFYVYLYVGSILFVIFLY 294
            .|  :||.     ..|..:...|:.||..:..:..:|:: :|....|.|...|.:.|.::.:: :
 Frog   107 AK--KTGR-----LFSGLFGLNLMFLGGTVVSSVALSNKAVPERDSQSFLCILMLLSSVWALY-H 163

  Fly   295 ISAFRNRSLFNALKDYHEKNSNVHLKHKVTHFGSFYLRVGAIAFAIGTMVYSGLEFGQ------- 352
            :...||            :|..||..|   |.|:.:|:.....|.:.:::.|..|.|.       
 Frog   164 LLFIRN------------QNGAVHHDH---HAGAMWLKASLAIFGVCSIILSIFEIGHALLLQNC 213

  Fly   353 -------FFELNGHPGCRDVFVAITPICRMVLCIAQVQFIFLNTTYMDMARHKVTSRFGLMHMVA 410
                   ||.:      ..|||::..:...|.|...||.           .|.|| |:|:|..:|
 Frog   214 EILMDIVFFSI------EIVFVSVQTVLLWVSCKDCVQM-----------HHSVT-RYGIMLTLA 260

  Fly   411 TNLCEWLYVLVEETKHEIFHISQHEVDPAHDLVIHNSSMSRTDWAAVNESLHQHHHHHALNNTLV 475
            |::..||..:::::..:...|.|           .||:...:     ||                
 Frog   261 TDILLWLTAVIDDSLEQDLEILQ-----------SNSTQDES-----NE---------------- 293

  Fly   476 ANVSSVIVNMTITPSPTPAAFSGCSRTTIMGALVQQLSPFLFPCTIEYSLICAVILFEMWKTVKS 540
                     |.....||.:...|..:..:.          :||..||||||||.:||.|||    
 Frog   294 ---------MAQCQCPTDSMCWGLKQGYVT----------MFPFNIEYSLICATLLFIMWK---- 335

  Fly   541 IPDIDKTRKNSVKPAAAKPAHHFSVDCSQSHKGLFFGILIIVMTIISMIMYFVLYTQPGYELVAT 605
              ::.:..|....|    |.|.|.:      :|:.:|.||....::..|..||     .|::.||
 Frog   336 --NVGRREKLHSDP----PRHTFQL------RGIIYGPLIGGAALLVGISVFV-----QYQVEAT 383

  Fly   606 Q-EVTLWETFMYF-----------MCAAAVI---------------TG-----MILMRDL----- 633
            . .|::....||:           :|:.|.|               ||     .:.|.|:     
 Frog   384 SGMVSILSYHMYYGYKMIILAPMIVCSVAGIIAHSLREKEKKGQKETGRSDQDWLHMEDVGSENK 448

  Fly   634 -------RYIKNTSDE--------------------------------------HHSMDLDNLLL 653
                   :|..:..||                                      :::..||..||
 Frog   449 NTDYSSGQYQSSQGDEKIQGYSLAQFALDNEKEKLEHRQGNTTKKHNTHQGKMKNYTRKLDVTLL 513

  Fly   654 IVAQTGVYLYGMFSILGSYFAKWDTVPDRVEGII---AEVFGVVQTSLQTMFILHS--------- 706
            .|:..|......|||:.:..    |.|..:...:   ..:..::|...|||||:.|         
 Frog   514 FVSAVGQLGISYFSIIATVV----TTPWTMLSALNFSNSLLLILQYLSQTMFIIESMRSIHEEEK 574

  Fly   707 --------SHRR------------C--RGTNQVRRKPGREIITFLLVANIAIWFVNTLIKGRAVF 749
                    ||||            |  .|...:.|:..:|:..||::.||..|.:..........
 Frog   575 EKPGHHEESHRRMSVQEMHKAPPSCLDAGHLGLSRRVVKEMAMFLMICNIMCWILGAFGAHPLYM 639

  Fly   750 RESHLEFFGVWGWTIITHISMPLAIFYRFHSTICLFEVW 788
            .....:.:|...|..|.:|.:||::|||.||...|.||:
 Frog   640 NGLERQLYGSGIWLAILNIGLPLSVFYRMHSVGILLEVY 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLbNP_608758.1 Otopetrin 330..778 CDD:281218 116/577 (20%)
otop3NP_001106584.1 Otopetrin 185..667 CDD:281218 115/575 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 169 1.000 Inparanoid score I4017
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9424
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X278
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.060

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