DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG44002 and gl

DIOPT Version :10

Sequence 1:NP_608754.1 Gene:CG44002 / 33535 FlyBaseID:FBgn0264744 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster


Alignment Length:205 Identity:67/205 - (32%)
Similarity:105/205 - (51%) Gaps:43/205 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 NKAPTN--------EVSTQEESKTAQSD-------NVSEDKGHICTQCHMSFRRPGLLELHILRH 166
            :|:||:        .:|..|:.:.:..|       :..|.|.::|..|..::.||..|:.|:..|
  Fly   395 HKSPTSYQAAALGLSLSAFEDEEDSNEDLDGDEGSSGGEMKPNLCRLCGKTYARPSTLKTHLRTH 459

  Fly   167 HTTDGPRPMSSTSEHAVKEELRTKARQLSRNSTHTCRLCNKTFCSKASCVRHQKTHTGEKPFACE 231
               .|.||                         :.|..|||:|...|:...|.:||||:|||.|.
  Fly   460 ---SGERP-------------------------YRCPDCNKSFSQAANLTAHVRTHTGQKPFRCP 496

  Fly   232 ICQKPFADLASVKRHLRTHTGERPFKCLTCQSAFSDGSALRQHIRIHTGERPYKCDMCDKFFRER 296
            ||.:.|:..:||..|:|||:||||::|.:|:.:|||.|.|.:|:|||:||:||:|.:|...|.:.
  Fly   497 ICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQS 561

  Fly   297 SDARKHMMSH 306
            .:..:||..|
  Fly   562 GNLNRHMRVH 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG44002NP_608754.1 zf-AD 4..74 CDD:462262
C2H2 Zn finger 146..166 CDD:275368 6/19 (32%)
COG5048 <162..302 CDD:227381 51/139 (37%)
C2H2 Zn finger 202..222 CDD:275368 7/19 (37%)
C2H2 Zn finger 230..250 CDD:275368 8/19 (42%)
C2H2 Zn finger 258..278 CDD:275368 9/19 (47%)
SUF4-like 282..>342 CDD:411020 8/25 (32%)
C2H2 Zn finger 286..311 CDD:411020 6/21 (29%)
C2H2 Zn finger 286..306 CDD:275368 5/19 (26%)
C2H2 Zn finger 314..335 CDD:411020
C2H2 Zn finger 314..333 CDD:275368
glNP_001262708.1 COG5048 <426..571 CDD:227381 60/172 (35%)
C2H2 Zn finger 439..459 CDD:275368 6/19 (32%)
C2H2 Zn finger 467..487 CDD:275368 7/19 (37%)
C2H2 Zn finger 495..515 CDD:275368 8/19 (42%)
C2H2 Zn finger 523..543 CDD:275368 9/19 (47%)
C2H2 Zn finger 551..571 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.