DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG44002 and CG17328

DIOPT Version :10

Sequence 1:NP_608754.1 Gene:CG44002 / 33535 FlyBaseID:FBgn0264744 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster


Alignment Length:339 Identity:92/339 - (27%)
Similarity:131/339 - (38%) Gaps:73/339 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRVCLASSKNMVNIFEERQDLPVSIAHMIIECTGFKVEKGDSLPHSICPPCVKDAHNAFTIIKTY 69
            |||||.....:.:|:.  .|..:..:.|:::|...:|.|.|.||..||..|:.....||...:..
  Fly     9 CRVCLEELHPVTSIYS--TDFAMMPSVMLMQCAKIRVFKTDGLPSVICNNCIYRLGVAFHFKQEC 71

  Fly    70 E------RSYQVFYEV--QDTVLEEELSEDVIIELSDSDEVILIDEQEEKVHLSENKAPTNEVST 126
            |      |.|....|.  ||.....:..|..::...||||...:|.:..|......:.|..|   
  Fly    72 ENSDLRLRQYLGILESWRQDAATNTDFVEKPLLPQRDSDEEEPVDAKVSKRRSRYQRKPPEE--- 133

  Fly   127 QEESKTAQSDNVSEDKGHICTQCHMSFRRPGLLELHILRHHTTDGPRPMSSTSEHAVKEELRTKA 191
                                                    |...||:|:.               
  Fly   134 ----------------------------------------HKKRGPKPVP--------------- 143

  Fly   192 RQLSRNSTHTCRLCNKTFCSKASCVRHQKTHTGEKPFACEICQKPFADLASVKRHLRTHTGERPF 256
                 ...|||..|:|:|...|...:|.:|||||||:.|..|.:.||...::|.|.|||||::||
  Fly   144 -----KMPHTCYECHKSFKCIAQLTQHIRTHTGEKPYQCSFCIQRFAQKYNLKVHERTHTGDKPF 203

  Fly   257 KCLTCQSAFSDGSALRQHIRIHTGERPYKCDMCDKFFRERSDARKHMMSHTAEKRFKCSQCERRF 321
            :|..|...||.....:.|.:||.|.|...|.:|.|.|....|..|||::||..|...|..|.:.|
  Fly   204 QCEICSKQFSALGNFQAHQKIHLGVRDQVCSLCQKGFYTAGDLSKHMITHTGIKNHHCDVCGKAF 268

  Fly   322 RQPKGLRRHVKLCH 335
            .:.:.:|.|....|
  Fly   269 SRRRDMRTHKLKLH 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG44002NP_608754.1 zf-AD 4..74 CDD:462262 21/74 (28%)
C2H2 Zn finger 146..166 CDD:275368 0/19 (0%)
COG5048 <162..302 CDD:227381 46/139 (33%)
C2H2 Zn finger 202..222 CDD:275368 6/19 (32%)
C2H2 Zn finger 230..250 CDD:275368 7/19 (37%)
C2H2 Zn finger 258..278 CDD:275368 5/19 (26%)
SUF4-like 282..>342 CDD:411020 18/54 (33%)
C2H2 Zn finger 286..311 CDD:411020 10/24 (42%)
C2H2 Zn finger 286..306 CDD:275368 8/19 (42%)
C2H2 Zn finger 314..335 CDD:411020 5/20 (25%)
C2H2 Zn finger 314..333 CDD:275368 5/18 (28%)
CG17328NP_609786.2 zf-AD 8..80 CDD:214871 20/72 (28%)
COG5048 146..>211 CDD:227381 30/64 (47%)
C2H2 Zn finger 149..169 CDD:275368 6/19 (32%)
C2H2 Zn finger 177..197 CDD:275368 7/19 (37%)
zf-H2C2_2 189..213 CDD:463886 11/23 (48%)
C2H2 Zn finger 205..225 CDD:275368 5/19 (26%)
C2H2 Zn finger 233..253 CDD:275368 8/19 (42%)
zf-H2C2_2 245..270 CDD:463886 10/24 (42%)
C2H2 Zn finger 261..282 CDD:275368 5/20 (25%)
C2H2 Zn finger 318..338 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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