Protein Alignment Mad and RIM1

DIOPT Version :9

• Sequence 1: NP_001259992.1
• Gene: Mad / 33529
• FlyBaseID: FBgn0011648
• Length: 525
• Species: Drosophila melanogaster
• Sequence 2: NP_009958.2
• Gene: RIM1 / 850395
• SGDID: S000007222
• Length: 135
• Species: Saccharomyces cerevisiae
• Alignment Length: 71
• Identity: 17/71 - (23%)
• Similarity: 23/71 - (32%)
• Gaps: 23/71 - (32%)

  Fly   238 QFNHVAEPSMPHN----VSYSNSGFNSHSLSTSNTSVGSPSSVNSNPNSPYDSLAGTPPPAYSPS 298
            :|.|.....|..:    |....|.|..|            :|.|:|....| |:|.      .|.
Yeast     8 RFFHATTKKMDFSKMSIVGRIGSEFTEH------------TSANNNRYLKY-SIAS------QPR 53

  Fly   299 EDGNSN 304
            .||.:|
Yeast    54 RDGQTN 59

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mad	NP_001259992.1	MH1_SMAD_1_5_9	93..216	CDD:199814
		MH2_SMAD_1_5_9	325..525	CDD:199822
RIM1	NP_009958.2	SSB	19..116	CDD:395349	14/60 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0.75	Normalized mean entropy	S660
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.950