DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mad and SMAD9

DIOPT Version :10

Sequence 1:NP_001259992.1 Gene:Mad / 33529 FlyBaseID:FBgn0011648 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_006719890.1 Gene:SMAD9 / 4093 HGNCID:6774 Length:479 Species:Homo sapiens


Alignment Length:442 Identity:93/442 - (21%)
Similarity:151/442 - (34%) Gaps:85/442 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 SCPKCPKAFVNKGNLLN-HLETHTHEKSYACDICTKTFKYNVQLRLHMRIHTGERPHKCEICNRG 360
            :|..|.|..:|..:::: .||..|..|::....|..:  |..:.:..:.|.|.....||.:|   
Human    59 TCSNCSKDILNPKDVISVQLEDTTSCKTFCSLSCLSS--YEEKRKPFVTICTNSILTKCSMC--- 118

  Fly   361 FSQLSNLRSHRKTHSKVKPYKC-HLCLKSFTMLDNLTAHSAKCLKDKFRCTLCSKSFAKEGNLLS 424
              |.:.:..:...:..||...| :.||..|...:|...:   |      |..|. ::....:.||
Human   119 --QKTAIIQYEVKYQNVKHNLCSNACLSKFHSANNFIMN---C------CENCG-TYCYTSSSLS 171

  Fly   425 HL-----QSHSDGIVEKMFKCEMCPKSFKNK---------------EDWKRHVRVHTGEKPYTCD 469
            |:     |||       .|.......::|.|               .|.........|:....|.
Human   172 HILQMEGQSH-------YFNSSKSITAYKQKPAKPLISVPCKPLKPSDEMIETTSDLGKTELFCS 229

  Fly   470 I-CSKGFAQ-----KANLLSHRK--THLKPNVTYSCDR-CARTFRSQKVLQMHVPKCTGGAGPIE 525
            | |...:::     .:.|||.:|  |.:..|:....|. .|....:..|||..|...|..|..|.
Human   230 INCFSAYSKAKMESSSELLSPKKDTTPVISNIVSLADTDVALPIMNTDVLQDTVSSVTATADVIV 294

  Fly   526 GAS-VPPSAPVTPVSESIPDSP--SPGAGVSLTTTSSSAVEAAANSTPPTLSEALSDLLRYEIAL 587
            ..| ..||.|...|:.|..:.|  ||.:.|.......|:.|...::..   |..:||.|.:.   
Human   295 DLSKSSPSEPSNAVASSSTEQPSVSPSSSVFSQHAIGSSTEVQKDNMK---SMKISDELCHP--- 353

  Fly   588 RAPLELQQMLLGHIDRKGKPAQAGP-----------GGKAAGRRYRCDV-CFKGYS-QYPSLIKH 639
            :...::|::       |||......           ..|.....|.|.: |.|.:| ...|...|
Human   354 KCTSKVQKV-------KGKSRSIKKSCCADFECLENSKKDVAFCYSCQLFCQKYFSCGRESFATH 411

  Fly   640 RKLHFKVPPLVKVLAGKAGHHHQQDYEDGEMEEPSDGLVQPTGELHCRGVGG 691
            ...::| ..|.|....:....|.:..|.....:..||.|.....:|.:.:.|
Human   412 GTSNWK-KTLEKFRKHEKSEMHLKSLEFWREYQFCDGAVSDDLSIHSKQIEG 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MadNP_001259992.1 MH1_SMAD_1_5_9 93..216 CDD:199814
MH2_SMAD_1_5_9 325..525 CDD:199822 46/229 (20%)
SMAD9XP_006719890.1 MH1_SMAD_1_5_9 13..136 CDD:199814 18/83 (22%)
Atrophin-1 <140..>258 CDD:460830 26/134 (19%)
MH2 267..>420 CDD:469593 37/166 (22%)
Blue background indicates that the domain is not in the aligned region.

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