DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mad and Smox

DIOPT Version :10

Sequence 1:NP_001259992.1 Gene:Mad / 33529 FlyBaseID:FBgn0011648 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_318870.3 Gene:Smox / 1279189 VectorBaseID:AGAMI1_006596 Length:506 Species:Anopheles gambiae


Alignment Length:525 Identity:259/525 - (49%)
Similarity:317/525 - (60%) Gaps:108/525 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 LFSFTSPAVKKLLGWKQ----GDEEEKWAEKAVDSLVKKLKKRKGAIEELERALSCPGQPSKCVT 150
            :..||.|.||:||||::    ...|.||.||.:.||.||:|| ..|:|||||||:.....:||:.
Mosquito     1 MLPFTPPIVKRLLGWRKVSPDDSAEGKWGEKVIKSLAKKMKK-SSALEELERALTAQSSHTKCIP 64

  Fly   151 IPR--SLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLELCQYPFSAKQKEVCINPYHYKR 213
            |.|  |..|...|:.:|||||||.||:||||||.||.|||||::|:|.:..|:.|||||||||.|
Mosquito    65 ISRNASAIGENGVALKKGLPHVICCRLWRWPDLNSHTELKPLDVCEYAYHLKKDEVCINPYHYAR 129

  Fly   214 VESPVLPPVLVPRHSEFAPGHSMLQFNHVAEPS-----------MPHNVSYSNSGFNS------- 260
            .||          ||:    ||..|.:...:.|           :|.|:| ::.|.||       
Mosquito   130 NES----------HSQ----HSQQQQSPQQQQSSQQLQQPLTILVPKNLS-NSQGENSVTYTLDD 179

  Fly   261 -----------HSLSTSNTSVGSPSSVNS--------NPNSPYDSL------------------- 287
                       ::|:.:..:...||.|.|        .||..:..|                   
Mosquito   180 LSNTVPVNTQYNALNDNYVTSPQPSQVTSRQLQQQQLQPNQLHQQLQQQQQQQQLSSPCYMEATL 244

  Fly   288 -----------------------AGTPPPAYSPSEDGN----SNNPNDGGQLLDAQMGDVAQVSY 325
                                   ..||||.|. ||||:    ::|..|..::..::| |...|.|
Mosquito   245 GQQIPTNTTIMDSVSVGVPNIPNTETPPPGYM-SEDGDPLDQNDNMTDLSRMSPSEM-DTQPVMY 307

  Fly   326 SEPAFWASIAYYELNCRVGEVFHCNNNSVIVDGFTNPSNNSDRCCLGQLSNVNRNSTIENTRRHI 390
            .||.||.||:|||||.||||.||.:..|:.|||||:|| ||:|.|||.|||||||..:|.|||||
Mosquito   308 HEPTFWCSISYYELNLRVGETFHASQPSITVDGFTDPS-NSERFCLGLLSNVNRNEVVEQTRRHI 371

  Fly   391 GKGVHLYYVTGEVYAECLSDSAIFVQSRNCNYHHGFHPSTVCKIPPGCSLKIFNNQEFAQLLSQS 455
            ||||.|||:.|||:|||||||:|||||.|||..:|:||:|||||||||:||||||||||.|||||
Mosquito   372 GKGVRLYYIGGEVFAECLSDSSIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFATLLSQS 436

  Fly   456 VNNGFEAVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNA 520
            |:.||||||:||:||||||||||||||||.||.|||||||||:||:|||||||:||||||||...
Mosquito   437 VSMGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDRVLTQMGSPRLP 501

  Fly   521 ISSVS 525
            .||:|
Mosquito   502 CSSMS 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MadNP_001259992.1 MH1_SMAD_1_5_9 93..216 CDD:199814 70/128 (55%)
MH2_SMAD_1_5_9 325..525 CDD:199822 152/199 (76%)
SmoxXP_318870.3 MH1 5..131 CDD:469592 69/126 (55%)
MH2_SMAD_2_3 305..495 CDD:199826 146/190 (77%)

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