DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toc and Mtus2

DIOPT Version :10

Sequence 1:NP_477153.1 Gene:toc / 33526 FlyBaseID:FBgn0015600 Length:2162 Species:Drosophila melanogaster
Sequence 2:NP_001361029.1 Gene:Mtus2 / 498136 RGDID:1562533 Length:1350 Species:Rattus norvegicus


Alignment Length:1547 Identity:309/1547 - (19%)
Similarity:513/1547 - (33%) Gaps:503/1547 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   653 LLKKQSSFDLDESLGILTPDQMKDFLDSPHNNLMHNLEMIRMHHPNLLQLRMEQTPSPEELPLDP 717
            |..|:|.|           .|::|..:...||   |..::|....|..|:.:|.:.|.:|    |
  Rat     5 LAPKKSCF-----------SQLRDHREGAKNN---NDNILRTGDTNANQIMLEVSASCDE----P 51

  Fly   718 IEIKSEIVKQVEASQNQVNTSQHSKLSNSFITSVTSVTSLDTGYQGDGEMSRPASRGACDHSPSN 782
               ||..:.....:.|......|    ..|......:..|..|.|......|.:......|...:
  Rat    52 ---KSRDLDDEIGNANLSRPQYH----GHFQKEPLHLQGLGKGSQAGSASQRDSQSSLTVHRQLS 109

  Fly   783 GPH-LGRVSRQ-------PSF----------PPPNPAPLRRQDPMTDSDFFTESDADDVLHRGDR 829
            ..| :.|.:.|       |||          .|...|.:.|..|   .|...::..::.|.|..|
  Rat   110 EEHTVKRGTLQTPQSIQGPSFSSWRNAVGQASPEVSAEIPRHTP---KDKLAKTLDNEELKRASR 171

  Fly   830 RAQVIDG-------QLYGPDMMQPSASVP-------------------QMEDSCMESSGIF---- 864
            .|....|       |...||:.:|...||                   ...|...|.:|:.    
  Rat   172 SAAAAGGITPTTNPQPAQPDISEPQGHVPGHGEGPQGTPASHSPGKVFSPGDGTSEGNGVSLPKP 236

  Fly   865 --------------------TDVENRC----------------DEEMRQPELEF-------DVDM 886
                                .||.|:|                :..:..||:..       .|::
  Rat   237 STSEAKGSSPSDTKVEGTRGPDVHNQCTARAELTPSLASALRENPSLCHPEVYLGQGTGKPKVEL 301

  Fly   887 DMSPDDSSQTMRKGQGQPISTQQQQNQ--------LAPQQRPPSSCLSSSSAATTLSQSLSNRTS 943
            ......:.:.:...|.|.:..:::::.        |..:.|..:..|:||.....:.:       
  Rat   302 KYIQPRNEEGLTSAQAQALVCREERSTSPVDRKELLEKEYREATGQLNSSQHQLGVGR------- 359

  Fly   944 YCSVDGGSARSFCGDEAFAAGRSTTTTAAAAAAAALSVQKTTSPRPHASLSSLCTVENFRGSVSS 1008
                 |||.....|..|...|....|.|.:||.|..:....|.                      
  Rat   360 -----GGSQEDGIGVSAGVEGSLQATPAPSAAPAGEAGTGLTG---------------------- 397

  Fly  1009 NSSIASPKSCKSSVTKTSAGKSRVLKSPKSPKSPK-----SPLNRKAHTPNKWDAVMNKIASNKS 1068
                           |.|||..|:.:...|.|:..     :|:.|   .||:             
  Rat   398 ---------------KASAGAGRMARETASGKAAPDDGQVTPVLR---DPNE------------- 431

  Fly  1069 LIKTNYNDVKSKVS--TTRIMTPASGSSPVSGSGS--GSVSRTASSPRASP-SVSASARRSPSAT 1128
                   ...|:||  ..|:.:..|||:.:..||.  |. :||.:|...|| |.|..||:|....
  Rat   432 -------SAPSEVSGEERRLGSGNSGSAKLLASGPFVGG-NRTDASELLSPRSSSLEARKSKETV 488

  Fly  1129 PKVPPKMLLAKRPSSSS------GKVNATPSP---------PPHATPPTRQ-------PLDKGSV 1171
            ..|.....|.:..:.:.      ..|.:||:|         ..:.|||:..       .:|.||:
  Rat   489 TSVAEDKNLPENAAQTDVTPAGVDSVFSTPAPLHPETTVNLTEYLTPPSSSSQELGVFSVDTGSL 553

  Fly  1172 GAGSVGGGGARAVKT-PKSPTSPTTPT-----------TPTS----------------------- 1201
            ...|...||.:.:.| ||.|...|.|:           ||:|                       
  Rat   554 SVASAPTGGGQVLNTSPKVPDKTTCPSGIPKSLTHPKDTPSSQEALEKPETEKTEERTEAKPILM 618

  Fly  1202 PPAKRLQTSLVSRGRSYSKDSHKSSHTDLSLM----------CNASSSRPSNSASGSGSPKLLAN 1256
            |..|.::..:::..|   ::....|..|.||:          |  ....|....:.|..|.....
  Rat   619 PKPKHVRPKIITYIR---RNPQALSQGDASLVPVGLPYAPPAC--GMPLPQEEKASSLQPPANMY 678

  Fly  1257 TQLRAAKKRDVRNLSISPTDL---GPPPKTQQTTKGQSTRSKSSATPTP------TPTSIHKRLN 1312
            .:|    |.|::...:.|:.|   |..|.....:: .|.:.....|..|      :|...|..:.
  Rat   679 EKL----KPDLQKPRVFPSGLMVSGIKPPAHHFSQ-MSEKFLQEVTDHPGKEEFCSPPYTHYEVP 738

  Fly  1313 GTLASTAAIATPIKGVATKS---GATNKLQQSAKTKSTASIKSPAIVGVSEESLRSGVDQTELQE 1374
            .|...:|.:..|..|:...|   ...:::..:::..|..||..|..:..:....  |.|.::|:.
  Rat   739 PTFYRSAMLLKPQLGLGAMSRLPSTKSRILIASQRSSAGSIHPPGSIATATSFY--GSDPSDLKR 801

  Fly  1375 LNNGQSA-TGCP----TPP------------------------------------MARDSKRTSI 1398
            .:|..:| :|.|    .||                                    .:|...|.:.
  Rat   802 ASNSNAAKSGLPKSGLRPPGYSRLPAAKLAAFGFVRSSSVSAVPSTQSLDSAQQEQSRPVTRPTF 866

  Fly  1399 GNELPCETEAKLKRCEDQQD---------PQASTTASP-----LPMINPQEQEASGQVKEATITT 1449
            |:    |.:..||:....:|         |.:|:.|:|     ||........|..:.:......
  Rat   867 GS----EEQVSLKQAVPSKDTPKGAGRAAPASSSNATPPRRSLLPAPKSTSTPAGAKKEPQKDPE 927

  Fly  1450 ANEPNALSLPDEISNSVSSTTMLATPRVDIAAQYPVL-----------KPFTENGELDCARLAKF 1503
            |.:| |:|.|   ..:.|:||.|.:|      .||..           ||..:..|.: .:||:.
  Rat   928 AKKP-AVSSP---KRTASATTKLHSP------GYPKQRTTAPRNEVPPKPDLQAREAE-RQLAQR 981

  Fly  1504 FQDTQFERKEEQRQILGLSVMVQFMSKEL-------DAVACKENKHQCARTKGTLEKTILLLQHT 1561
            .:|    |.|.|.:.|||:      .:||       ||:|... ||...:::..|.|.    :..
  Rat   982 LRD----RCEWQARQLGLA------RRELKKAIQGFDAMAVSA-KHFFGKSERALAKE----KEL 1031

  Fly  1562 QKDCERLREDLEDKGLEWIQRQQEKEYLHRTELKQAEEKLMEVQLRAKLKFCELESQLRAKDEES 1626
            ..:...:|:::.....:..:.|:|||.|.|    :.||:|..:..:.:.:..||:.:|    ::.
  Rat  1032 SIELANIRDEVAFNTAKCEKLQKEKEALER----RFEEELRRLGWQQQAEVQELQERL----QQQ 1088

  Fly  1627 KQAQEAYRMEVSHK---LALKQEHLRTAEQKIQELQTRLQQVETEEQGHREELIRKENIHTARLA 1688
            .||:.| |::..|:   |.::.:|        ||      |||.....|...|:..||.||..:.
  Rat  1089 FQAESA-RLQAEHQDQMLRMRCQH--------QE------QVEDITASHEAALLEMENNHTVAIT 1138

  Fly  1689 ----EANQREQDLIDRVKSLTKELNTLKANKEHNERDLRDRLALSQDEISVLRTSSQRRSPCTSL 1749
                :.:.:.|:|:...:...|||       |.|...|  ||:| ||::..|...||      ||
  Rat  1139 ILQDDHDHKVQELMSTHEFEKKEL-------EENFEKL--RLSL-QDQVDTLTFQSQ------SL 1187

  Fly  1750 PDNAS------------------AELNRLTSEADSLRCVLELKQAEISALSKAKADLIHESEERL 1796
            .|.|.                  |....|..:..||:.|||:|..:|....|...:|....|:.:
  Rat  1188 RDRAQRFEEALRKTTEEQLEIALAPYQHLEEDMQSLKQVLEMKNQQIHLQEKKIIELEKLVEKNI 1252

  Fly  1797 KLSNRVALLEAQNEMLRTELEAKTEKEKEIQQKMEELQKAYKYESIKRTRLTYDKEELQYHLKQR 1861
            .|..::.:|:.|||.|:..::..|...:::.::...||:..:.|:.::.||:...|||       
  Rat  1253 ILEEKIQVLQQQNEDLKARIDQNTVVTRQLSEENANLQEYVEKETQEKKRLSRTNEEL------- 1310

  Fly  1862 SLQLQSAESKLQDLSTGSHDNSLSSHSRCSLGRSGLEIAVTTSSPTSPVMKG 1913
                      |..|.||...:.:.                  .||||||.:|
  Rat  1311 ----------LWKLQTGDPTSPIK------------------LSPTSPVYRG 1334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tocNP_477153.1 Mitofilin 1357..>1713 CDD:430783 92/435 (21%)
Smc <1545..>1838 CDD:440809 74/317 (23%)
Mtus2NP_001361029.1 PHA03247 <624..1007 CDD:223021 79/419 (19%)
SMC_prok_B <970..1310 CDD:274008 95/394 (24%)

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