DRSC/TRiP Functional Genomics Resources

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Protein Alignment FASN1 and CEM1

DIOPT Version :9

Sequence 1:NP_001137778.2 Gene:FASN1 / 33524 FlyBaseID:FBgn0283427 Length:2540 Species:Drosophila melanogaster
Sequence 2:NP_010983.2 Gene:CEM1 / 856790 SGDID:S000000863 Length:442 Species:Saccharomyces cerevisiae


Alignment Length:472 Identity:113/472 - (23%)
Similarity:193/472 - (40%) Gaps:99/472 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 LNDEIAITGFSGRLPESSTIEEFKQNLF---DGVDMV------NDDPRRWERGLYGLPDRI--GK 191
            ::..:.|||.....|...::.|...||.   :|:..:      |:|.:..|:   .:|..|  ||
Yeast     1 MSRRVVITGLGCVTPLGRSLSESWGNLLSSKNGLTPITSLPNYNEDYKLREK---SIPSTITVGK 62

  Fly   192 LKDSDLENFDQQFFGVHQKQAECMD-----PLLRMLLELTHEAIIDAG-LNPSDLR--------- 241
            :.    |||..:...:::......|     ..:::.|..|:||:.:|| |||:|:.         
Yeast    63 IP----ENFQNENSAINKLLFTSQDERRTSSFIKLALRTTYEALHNAGLLNPNDITINTSLCNLD 123

  Fly   242 ----------GSRTGVYIGVSNSETEQHWCSDADRVNGYGLTGCARAMFANRISFTFDFKGPSYS 296
                      ||...:|      :|...:.:|..|:|.|.:......|.|..:|..|:.:|.|:|
Yeast   124 HFGCLIGSGIGSIQDIY------QTSLQFHNDNKRINPYFVPKILTNMAAGNVSIKFNLRGLSHS 182

  Fly   297 IDTACSSSLYALEQAFSDMREGKVDNALVAGAGLILKPTMSLQFKRLNMLSPDGSCKAFDESGNG 361
            :.|||::...::..||:.:|.|..|..:...:...|.|.....|.|...::.:|..:.||...:|
Yeast   183 VSTACATGNNSIGDAFNFIRLGMQDICVAGASETSLHPLSLAGFIRAKSITTNGISRPFDTQRSG 247

  Fly   362 YVRSDGCVVLLLQRTSAARRVYASILNVRTNTDGFKEQG--ITYP--IGKMQNRLIRETYEEIGL 422
            :|..:||.:::::....|::..|:|::..... |.....  ||.|  .|....|.|....:...|
Yeast   248 FVLGEGCGMIVMESLEHAQKRNANIISELVGY-GLSSDACHITSPPADGNGAKRAIEMALKMARL 311

  Fly   423 NPADVVYVEAHGTGTKVGDPQEVNSITDFFC--KDRTTPLLIGSVKSNMGHSEPASGVCSVAKIL 485
            .|.||.||.||.|.|.:||..|..::.....  :.::.||.|.|.|..:||...|:|.......:
Yeast   312 EPTDVDYVNAHATSTLLGDKAECLAVASALLPGRSKSKPLYISSNKGAIGHLLGAAGAVESIFTI 376

  Fly   486 IAMEEGVIP----------------GNLHY--NKP----NPDLYGLVDGRLKVVDRNLPWNGGII 528
            .::::..:|                ..||:  :||    ||. |.|                   
Yeast   377 CSLKDDKMPHTLNLDNVLTLENNEADKLHFIRDKPIVGANPK-YAL------------------- 421

  Fly   529 GLNSFGFGGANAHVILK 545
             .|||||||.|..::.|
Yeast   422 -CNSFGFGGVNTSLLFK 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FASN1NP_001137778.2 PksD 137..1142 CDD:225858 113/472 (24%)
PKS 140..544 CDD:238429 112/467 (24%)
KAsynt_C_assoc 502..612 CDD:292814 14/48 (29%)
Acyl_transf_1 633..950 CDD:298668
hot_dog 990..1234 CDD:294345
NADB_Rossmann 1358..>1550 CDD:304358
PKS_ER 1593..1883 CDD:214840
enoyl_red 1595..1883 CDD:176179
KR_1_FAS_SDR_x <1901..2141 CDD:187657
PKS_PP 2154..>2206 CDD:214834
Abhydrolase 2286..2535 CDD:304388
CEM1NP_010983.2 KAS_I_II 3..436 CDD:238430 112/467 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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