DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17221 and rtn4ip1

DIOPT Version :9

Sequence 1:NP_001259984.1 Gene:CG17221 / 33521 FlyBaseID:FBgn0031500 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001016074.1 Gene:rtn4ip1 / 548828 XenbaseID:XB-GENE-854814 Length:358 Species:Xenopus tropicalis


Alignment Length:369 Identity:134/369 - (36%)
Similarity:201/369 - (54%) Gaps:25/369 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 MRGWQLHNYGDIDELQLSEMLKIPQIRCSNECLVRIRATAVNPIDLAMLRGYGATVLNKMRCQP- 115
            |..|.:..||..|.::.:..:..|.|...||.::::.||::||||:.|..|||:..||..| .| 
 Frog     1 MPAWVIDKYGSNDVMRFNSNMVFPVINYPNEVIIKVHATSLNPIDVNMRNGYGSASLNMTR-DPL 64

  Fly   116 ---GDGIEFPLILGREFCGELVQTGMGVS-LPLGSRVWGVVPLQATIGSHAEYVAVPSYCLAPAP 176
               ..|.||||:|||:..|.:::.|:.|. ...|.:|||.:|.... |:.||:|......::..|
 Frog    65 NVKSSGSEFPLVLGRDVSGVVMECGLNVRYFKPGDQVWGAIPPWKQ-GALAEFVVTSGNEISMKP 128

  Fly   177 KELDDYEAASVLYAGLTAWSGLYITGGLGGPCGATTASGGGAHKRVLVLGGSGGVGTLAIQILKS 241
            |.|...||||:.|..||||:      .|...||.......|  ||||::|.||||||.|||:||:
 Frog   129 KSLSHTEAASLPYVTLTAWA------ALANSCGLNKEKCPG--KRVLIIGASGGVGTAAIQLLKA 185

  Fly   242 QKVQVLATCSENAIEMVRNLGADLVVDYNNPQAMEELCKYAPYDIVLDCAGQGGQKAAESKYDFR 306
            ....|.|.|||:|..::::||||.:|||...|..|:|.....:|::||..|...:|.|   :.|.
 Frog   186 WGAHVTAVCSEDAFTLIKSLGADDIVDYKAAQLSEQLKSQELFDVILDNVGGETEKLA---FQFL 247

  Fly   307 Q------YITFSSPLLANIDKQGLGVGALKNVFDLFQTNVRSVTQRGGLVKWGFFSPAPQGIQFL 365
            :      |.|..:|.|.|.|:.|:..|.::....|....|:.:. :|...:|.||||:...:..:
 Frog   248 KPWSGATYATLVTPFLYNNDRLGIADGMMRTGVTLSSKVVKHLC-KGVHYRWVFFSPSGPYLDEI 311

  Fly   366 QKLVEQRKLMPLIDSSYGFSELPKAFEKMKSGHLRGKIVVKLRE 409
            .:||:..|:.|:||..:.||::|.||.|::.||.|||.|:|:.|
 Frog   312 GELVKDGKIRPVIDEIFSFSDVPNAFSKVEKGHARGKTVIKVTE 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17221NP_001259984.1 RTN4I1 52..406 CDD:176210 132/364 (36%)
Qor 52..406 CDD:223677 132/364 (36%)
rtn4ip1NP_001016074.1 Qor 1..353 CDD:223677 132/365 (36%)
RTN4I1 1..352 CDD:176210 132/364 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 1.000 Domainoid score I7987
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H13105
Inparanoid 1 1.050 222 1.000 Inparanoid score I3442
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D558414at33208
OrthoFinder 1 1.000 - - FOG0001925
OrthoInspector 1 1.000 - - oto105101
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3759
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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