DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17221 and vat1

DIOPT Version :9

Sequence 1:NP_001259984.1 Gene:CG17221 / 33521 FlyBaseID:FBgn0031500 Length:413 Species:Drosophila melanogaster
Sequence 2:XP_002932557.1 Gene:vat1 / 493196 XenbaseID:XB-GENE-941589 Length:456 Species:Xenopus tropicalis


Alignment Length:424 Identity:99/424 - (23%)
Similarity:173/424 - (40%) Gaps:94/424 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SAPAKSVLSGSQTNDQATPPPTSKSADKMRGWQLHNYGDIDELQLSEMLKIPQIRCSNECLVRIR 88
            :|||:...:.:     |.|..|.||.      .|..:|..|:::|......|..: :.|.|||::
 Frog    45 AAPAQEEEAAA-----AQPEKTYKSL------VLSAHGGYDKVKLHTKKGSPTPK-AGEVLVRVK 97

  Fly    89 ATAVNPIDLAMLRGYGATVLNKMRCQPGDGIEFPLILGREFCGELVQTGMGVSLPLGSRVWGVVP 153
            |..:|..||...:|    |.:::.       ..|:.||.|..|.:.:.|.||:   ..:|...|.
 Frog    98 ACGLNFADLMARQG----VYDRLP-------SLPVSLGMECAGIVEELGEGVT---DRQVGDKVM 148

  Fly   154 LQATIGSHAEYVAVPSYCLAPAPKELDDYEAASVLYAGLTAWSGLYITGGLGGPCGATTASGGGA 218
            :....|...|.:::.:......|..:...|.|:.|...:||:..|:..|.|            ..
 Frog   149 VLNRFGLWQELISIQTNHTFLMPDGMSFEEGAAFLVNYITAYMILFHFGNL------------RP 201

  Fly   219 HKRVLVLGGSGGVGTLAIQILKS-QKVQVLATCSENAIEMVRNLGADLVVDYNNPQAMEELCKYA 282
            ::.||:...:|||||.|:|:.|: :.:.:..|.|.:..|.::..|....:||.:...:||:.|.:
 Frog   202 NQSVLIHMAAGGVGTAAVQLCKTVENITIFGTASASKHESLKESGVSHPIDYRSNDYVEEVRKVS 266

  Fly   283 P--YDIVLDCAG-------------QG------------GQK---AAESKYDFRQY-ITFSSPLL 316
            |  .|||:|..|             .|            |||   .|.:|..:.|: :|....:.
 Frog   267 PKGVDIVMDPLGGTDTCKAFNLLKPMGKLVIYGAANLLTGQKKNLMALAKSWWNQFNVTAMQLIN 331

  Fly   317 ANIDKQGLGVGALKNVFDLFQTNVRSVTQRGGLVKWGFFSPAPQGIQFLQKLVEQRKLMPLIDSS 381
            ||....|..:|.|.:..:|. |.|                     :..|..|.:|.|:.|.||:.
 Frog   332 ANKAVCGFHLGHLDDELELI-TGV---------------------VVTLLDLYKQGKIKPKIDTM 374

  Fly   382 YGFSELPKAFEKMKSGHLRGKIVV--KLREETGD 413
            :.|.::..|..:|:.....||:::  .:.:|.|:
 Frog   375 FSFEQVGDAMRQMQEKKNVGKVILIPDMPKEEGE 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17221NP_001259984.1 RTN4I1 52..406 CDD:176210 89/387 (23%)
Qor 52..406 CDD:223677 89/387 (23%)
vat1XP_002932557.1 MDR3 63..400 CDD:176236 91/391 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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