DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17221 and rtn4ip1

DIOPT Version :10

Sequence 1:NP_608746.1 Gene:CG17221 / 33521 FlyBaseID:FBgn0031500 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_956646.2 Gene:rtn4ip1 / 393323 ZFINID:ZDB-GENE-040426-1314 Length:387 Species:Danio rerio


Alignment Length:415 Identity:142/415 - (34%)
Similarity:224/415 - (53%) Gaps:45/415 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ILCLRQLV---RLNRR--QYSAPAKSVLSGSQTNDQATPPPTSKSADKMRGWQLHNYGDIDELQL 68
            ::|.|.||   |.:.|  .:||..::|                     |..|.:..||..|.|:.
Zfish     2 LMCRRWLVCSLRCHYRSFSFSAARRTV---------------------MPAWVIDKYGKNDVLRF 45

  Fly    69 SEMLKIPQIRCSNECLVRIRATAVNPIDLAMLRGYGATVLNKMRCQP----GDGIEFPLILGREF 129
            ::...:|.|...||.:|::.|..:||||::|..||||..: .|:..|    ..|.||||||||:.
Zfish    46 TKNAALPIIHYPNEVVVKVHAAGLNPIDISMRGGYGAATM-AMKRDPLNISQSGGEFPLILGRDV 109

  Fly   130 CGELVQTGMGVS-LPLGSRVWGVVPLQATIGSHAEYVAVPSYCLAPAPKELDDYEAASVLYAGLT 193
            .||:::.|:.|. ...|.:||..:|.... ||.||:|.|....::..||.|...||||:.|...|
Zfish   110 SGEIMECGLDVKYFKPGDQVWAAIPPWKQ-GSLAEFVVVSGNEVSHKPKSLRHDEAASIPYVAAT 173

  Fly   194 AWSGLYITGGLGGPCGATTASGGGAHKRVLVLGGSGGVGTLAIQILKSQKVQVLATCSENAIEMV 258
            |||.:..||||.        ......||||:|||||||||.|||::|:....|..|||:||..:|
Zfish   174 AWSAIVNTGGLN--------KDNSVKKRVLILGGSGGVGTFAIQMVKAWGAHVTVTCSQNAERLV 230

  Fly   259 RNLGADLVVDYNNPQAMEELCKYAPYDIVLDCAGQGGQKAA---ESKYDFRQYITFSSPLLANID 320
            |:||||.||||......::|..:..:|::||..|...:|.|   ...:...:::|..:|.|.|.|
Zfish   231 RDLGADDVVDYTAGPVEKQLKNFEKFDLILDSIGGETEKWALDLLKPWSGAKFVTLITPFLQNTD 295

  Fly   321 KQGLGVGALKNVFDLFQTNVRSVTQRGGLVKWGFFSPAPQGIQFLQKLVEQRKLMPLIDSSYGFS 385
            :.||..|.:::...:....|::: ::|...:||||:|:...:..:.::|:..|:.|:::..:.|:
Zfish   296 RLGLADGMMQSAVTVGCKVVKNL-RKGVHYRWGFFAPSGSALDEVSEMVDAGKVRPVVEEVFSFA 359

  Fly   386 ELPKAFEKMKSGHLRGKIVVKLREE 410
            ::|:||:|::.||.|||.||.:.|:
Zfish   360 QVPEAFQKVEQGHARGKTVVSIMED 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17221NP_608746.1 RTN4I1 52..406 CDD:176210 131/361 (36%)
rtn4ip1NP_956646.2 RTN4I1 29..380 CDD:176210 131/361 (36%)

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