DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17221 and SPBC16A3.02c

DIOPT Version :9

Sequence 1:NP_001259984.1 Gene:CG17221 / 33521 FlyBaseID:FBgn0031500 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_596787.1 Gene:SPBC16A3.02c / 2540039 PomBaseID:SPBC16A3.02c Length:347 Species:Schizosaccharomyces pombe


Alignment Length:395 Identity:100/395 - (25%)
Similarity:154/395 - (38%) Gaps:94/395 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 SKSADKMRGWQLHNYG-DIDELQLSEMLKIPQIRCSN-------ECLVRIRATAVNPIDLAMLRG 102
            :|||     |..:..| ..|.|.|.:.|.||     |       :.||.:.||::||:|..::..
pombe    11 TKSA-----WLYNRTGKPKDVLYLEKGLHIP-----NPAELGPYDVLVEVVATSINPLDYKLMNT 65

  Fly   103 YG--ATVLNKMRCQPGDGIEFPLILGREFCGELVQTGMGV-SLPLGSRVWGVVPLQAT---IGSH 161
            |.  |..|.|:          |.|.|.:|.|.::..|..| ......||||.......   .||.
pombe    66 YQMIAKALFKL----------PNIPGYDFAGRVLAVGSEVKEFSATQRVWGCQSFPRAGRQGGSC 120

  Fly   162 AEYVAVPSYCLAPAPKELDDYEAASVLYAGLTAWSGLY----ITGGLGGPCGATTASGGGAHKRV 222
            |.::......:...|..:...|.|....||||||..|.    :..|                .::
pombe   121 ATHIVTGDKDVWHLPDGVSFNEGAGFGIAGLTAWEVLVRQMKVKPG----------------TKL 169

  Fly   223 LVLGGSGGVGTLAIQILKSQKVQVLATCSENAIEMVRNLGADLVVDYNNPQAMEELCKYAPYDIV 287
            ::.|.||||||.|:.:.|:.:.:|....|...:::.::|||...:||.....:|.|....|||.|
pombe   170 VIEGASGGVGTFAVALAKALECEVTTISSTENLDLCKSLGATHTLDYKKDNLVERLADLGPYDFV 234

  Fly   288 LDCAGQGGQKAAESKYDFRQYITFSSPLLANIDKQGLGVGALKNVFDLFQTNVRSVTQR------ 346
            .||........|.||        |..|     |....|:|.     |:..:.|.|...|      
pombe   235 FDCVNDNVLYRASSK--------FVKP-----DGAFFGIGG-----DITLSYVGSRLSRTLRPRV 281

  Fly   347 -GGLVKWGFFSPAPQGI------QFLQKLVE---QRKLMPLIDSSYGFSELPKAFEKMKSGHLRG 401
             ||      .|.:...|      :.|:..|:   :..:..:|||.|.|.:..:||.::.:...:|
pombe   282 LGG------SSHSYYNILLHVDQEMLRDFVDFVMKHNIKTVIDSVYDFEDTVEAFNRLMTHRCKG 340

  Fly   402 KIVVK 406
            |:::|
pombe   341 KVIIK 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17221NP_001259984.1 RTN4I1 52..406 CDD:176210 96/387 (25%)
Qor 52..406 CDD:223677 96/387 (25%)
SPBC16A3.02cNP_596787.1 Qor 14..345 CDD:223677 97/390 (25%)
MDR1 15..344 CDD:176228 96/383 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0604
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 82 1.000 Inparanoid score I1826
OMA 1 1.010 - - QHG53549
OrthoFinder 1 1.000 - - FOG0001925
OrthoInspector 1 1.000 - - otm47385
orthoMCL 1 0.900 - - OOG6_100491
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3553
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.760

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