DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17221 and Rtn4ip1

DIOPT Version :9

Sequence 1:NP_001259984.1 Gene:CG17221 / 33521 FlyBaseID:FBgn0031500 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_570962.2 Gene:Rtn4ip1 / 170728 MGIID:2178759 Length:396 Species:Mus musculus


Alignment Length:387 Identity:140/387 - (36%)
Similarity:205/387 - (52%) Gaps:41/387 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 PP------TSKSADKMRGWQLHNYGDIDELQLSEMLKIPQIRCSNECLVRIRATAVNPIDLAMLR 101
            ||      ||..:..|..|.:..||..:.|:.::.:.:|.|...||.::::.|.:|||||:.|..
Mouse    28 PPFRGISTTSARSTVMPAWVIDKYGKNEVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRS 92

  Fly   102 GYGATVLNKMRCQP----GDGIEFPLILGREFCGELVQTGMGVS-LPLGSRVWGVVP--LQATIG 159
            |||||.|| |:..|    ..|.||||.|||:..|.:::.|:.|. ...|..||..||  .|.|: 
Mouse    93 GYGATALN-MKRDPLHMKTKGEEFPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVPPWKQGTL- 155

  Fly   160 SHAEYVAVPSYCLAPAPKELDDYEAASVLYAGLTAWSGLYITGGLGGPCGATTASGGGAHKRVLV 224
              :|:|.|....::..||.|...:|||:.|..|||||.:...|||..    ....|    ||.|:
Mouse   156 --SEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSD----RNCKG----KRALI 210

  Fly   225 LGGSGGVGTLAIQILKSQKVQVLATCSENAIEMVRNLGADLVVDYNNPQAMEELCKYAPYDIVLD 289
            ||.||||||.|||::|:....|.|.||::|.|:||.||||.|:||......|:|.....:|.:||
Mouse   211 LGASGGVGTFAIQVMKAWGAHVTAVCSKDASELVRKLGADEVIDYTLGSVEEQLKSLKLFDFILD 275

  Fly   290 CAGQGGQKAAES---KYDFRQYITFSSPLLANIDKQGLGVGALKNVFDLFQTNVRSVTQ------ 345
            ..|...:..|.:   |:....|:|..:|.|.|:|:.|:..|.|       ||.|...|:      
Mouse   276 NVGGSTETWALNFLKKWSGATYVTLVTPFLLNMDRLGVADGML-------QTGVTVGTKALKHLW 333

  Fly   346 RGGLVKWGFFSPAPQGIQFLQKLVEQRKLMPLIDSSYGFSELPKAFEKMKSGHLRGKIVVKL 407
            :|...:|.||..:...:..:.:||:..|:.|:|:.::.|||:|:||.|::.||.|||.||.:
Mouse   334 QGVHYRWAFFMASGPYLDEIAELVDAGKIRPVIERTFPFSEVPEAFLKVERGHARGKTVVNV 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17221NP_001259984.1 RTN4I1 52..406 CDD:176210 135/369 (37%)
Qor 52..406 CDD:223677 135/369 (37%)
Rtn4ip1NP_570962.2 Qor 43..395 CDD:223677 136/370 (37%)
RTN4I1 43..394 CDD:176210 135/369 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848706
Domainoid 1 1.000 80 1.000 Domainoid score I8606
eggNOG 1 0.900 - - E1_COG0604
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H13105
Inparanoid 1 1.050 213 1.000 Inparanoid score I3631
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53549
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001925
OrthoInspector 1 1.000 - - oto94901
orthoMCL 1 0.900 - - OOG6_100491
Panther 1 1.100 - - LDO PTHR11695
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3553
SonicParanoid 1 1.000 - - X3759
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.790

Return to query results.
Submit another query.