DRSC/TRiP Functional Genomics Resources

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Protein Alignment cnir and AT1G12340

DIOPT Version :9

Sequence 1:NP_608745.1 Gene:cnir / 33520 FlyBaseID:FBgn0243513 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_563903.2 Gene:AT1G12340 / 837788 AraportID:AT1G12340 Length:129 Species:Arabidopsis thaliana


Alignment Length:131 Identity:44/131 - (33%)
Similarity:67/131 - (51%) Gaps:19/131 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IYYVLTLADLECDYLNAQECCRRLNFWVIPKFGSHALLCVLLLLGGHWVMFLLNLPMVIWLFYEL 88
            |::::.|||||.||:|..:...|:|..|:|:|....:|||..||.|||.|.||.||   :|:|..
plant    14 IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLP---YLYYNF 75

  Fly    89 H----RQRRDSLGVYDPVDIHSRGLLKVHLRNCMIYLGYYFVMFFVGLYCLISSLIKGDPIKRYE 149
            |    ||.     :.|..:|.:  ||....:..:..|.|..:..|:.::.:|.|.:..     ||
plant    76 HLYSKRQH-----LVDVTEIFN--LLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDD-----YE 128

  Fly   150 D 150
            |
plant   129 D 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cnirNP_608745.1 Cornichon 8..133 CDD:397410 39/112 (35%)
AT1G12340NP_563903.2 Cornichon 14..117 CDD:397410 39/112 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I3430
eggNOG 1 0.900 - - E1_KOG2729
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 74 1.000 Inparanoid score I2426
OMA 1 1.010 - - QHG59615
OrthoDB 1 1.010 - - D1602458at2759
OrthoFinder 1 1.000 - - FOG0000471
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101313
Panther 1 1.100 - - O PTHR12290
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X297
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.840

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