DRSC/TRiP Functional Genomics Resources

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Protein Alignment cnir and cnih2

DIOPT Version :9

Sequence 1:NP_608745.1 Gene:cnir / 33520 FlyBaseID:FBgn0243513 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001072219.1 Gene:cnih2 / 779666 XenbaseID:XB-GENE-952875 Length:162 Species:Xenopus tropicalis


Alignment Length:152 Identity:42/152 - (27%)
Similarity:71/152 - (46%) Gaps:31/152 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ATFC--ITLLVYGAILLLLIYYVLTLADLECDYLNAQE-----------------CC--RRLNFW 50
            |.||  :||::..:::..:|::::...:|..|:.|..|                 ||  |:|   
 Frog     6 AAFCYMLTLVLCASLIFFIIWHIIAFDELRTDFKNPIEQGNPSRARERVKNVERICCLLRKL--- 67

  Fly    51 VIPKFGSHALLCVLLLLGGHWVMFLLNLPMVIWLFYEL----HRQRRDSLGVYDPVDIHSRGLLK 111
            |:|::..|.|.|::.:....||...||:|:   |||.|    ||....|..::|||.|.:..:|.
 Frog    68 VVPEYCIHGLFCLMFMCAAEWVTLGLNIPL---LFYHLWRYFHRPADGSEVMFDPVSIMNVDILN 129

  Fly   112 VHLRNCMIYLGYYFVMFFVGLY 133
            ...:.....|.:|.:.||..||
 Frog   130 YCQKEAWCKLAFYLLSFFYYLY 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cnirNP_608745.1 Cornichon 8..133 CDD:397410 39/149 (26%)
cnih2NP_001072219.1 Cornichon 8..151 CDD:367442 39/148 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1602458at2759
OrthoFinder 1 1.000 - - FOG0000471
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X297
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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