DRSC/TRiP Functional Genomics Resources

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Protein Alignment cnir and cnih2

DIOPT Version :10

Sequence 1:NP_608745.1 Gene:cnir / 33520 FlyBaseID:FBgn0243513 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001072219.1 Gene:cnih2 / 779666 XenbaseID:XB-GENE-952875 Length:162 Species:Xenopus tropicalis


Alignment Length:152 Identity:42/152 - (27%)
Similarity:71/152 - (46%) Gaps:31/152 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ATFC--ITLLVYGAILLLLIYYVLTLADLECDYLNAQE-----------------CC--RRLNFW 50
            |.||  :||::..:::..:|::::...:|..|:.|..|                 ||  |:|   
 Frog     6 AAFCYMLTLVLCASLIFFIIWHIIAFDELRTDFKNPIEQGNPSRARERVKNVERICCLLRKL--- 67

  Fly    51 VIPKFGSHALLCVLLLLGGHWVMFLLNLPMVIWLFYEL----HRQRRDSLGVYDPVDIHSRGLLK 111
            |:|::..|.|.|::.:....||...||:|:   |||.|    ||....|..::|||.|.:..:|.
 Frog    68 VVPEYCIHGLFCLMFMCAAEWVTLGLNIPL---LFYHLWRYFHRPADGSEVMFDPVSIMNVDILN 129

  Fly   112 VHLRNCMIYLGYYFVMFFVGLY 133
            ...:.....|.:|.:.||..||
 Frog   130 YCQKEAWCKLAFYLLSFFYYLY 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cnirNP_608745.1 Cornichon 8..133 CDD:460883 39/149 (26%)
cnih2NP_001072219.1 Cornichon 7..151 CDD:460883 39/149 (26%)

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