DRSC/TRiP Functional Genomics Resources

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Protein Alignment cnir and Cnih3

DIOPT Version :9

Sequence 1:NP_608745.1 Gene:cnir / 33520 FlyBaseID:FBgn0243513 Length:157 Species:Drosophila melanogaster
Sequence 2:XP_030099002.1 Gene:Cnih3 / 72978 MGIID:1920228 Length:187 Species:Mus musculus


Alignment Length:180 Identity:39/180 - (21%)
Similarity:77/180 - (42%) Gaps:46/180 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ATFC--ITLLVYGAILLLLIYYVLTLADL---------ECDYLNAQECCR---RLNF-------- 49
            |.||  ::|::..|::...|::::...:|         :|:.::|:|..|   |:.|        
Mouse     6 AAFCYMLSLVLCAALIFFAIWHIIAFDELRTDFKSPIDQCNPVHARERLRNIERICFLLRKVRGV 70

  Fly    50 -----------------------WVIPKFGSHALLCVLLLLGGHWVMFLLNLPMVIWLFYELHRQ 91
                                   .|:|::..|:|.|::.|....|:...||:|::.:.|:.....
Mouse    71 PPGGRRKGRRERGQQVNGSREGKLVLPEYSIHSLFCIMFLCAQEWLTLGLNVPLLFYHFWRYFHC 135

  Fly    92 RRDSLGV-YDPVDIHSRGLLKVHLRNCMIYLGYYFVMFFVGLYCLISSLI 140
            ..||..: |||..:.:...|....:.....|.:|.:.||..|||:|.:|:
Mouse   136 PADSSELAYDPPVVMNADTLSYCQKEAWCKLAFYLLSFFYYLYCMIYTLV 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cnirNP_608745.1 Cornichon 8..133 CDD:397410 33/170 (19%)
Cnih3XP_030099002.1 Cornichon 8..178 CDD:367442 33/169 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2729
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000471
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X297
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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