DRSC/TRiP Functional Genomics Resources

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Protein Alignment cnir and cnih1

DIOPT Version :10

Sequence 1:NP_608745.1 Gene:cnir / 33520 FlyBaseID:FBgn0243513 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001008067.1 Gene:cnih1 / 493429 XenbaseID:XB-GENE-1004741 Length:144 Species:Xenopus tropicalis


Alignment Length:139 Identity:42/139 - (30%)
Similarity:71/139 - (51%) Gaps:7/139 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ATFC--ITLLVYGAILLLLIYYVLTLADLECDYLNAQECCRRLNFWVIPKFGSHALLCVLLLLGG 69
            |.||  :.||:..|::...|::::...:|:.||.|..:.|..||..|:|::..||..||:.|...
 Frog     6 AAFCYMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMYLCAA 70

  Fly    70 HWVMFLLNLPMV---IWLFYELHRQRRDSLGVYDPVDIHSRGLLKVHLRNCMIYLGYYFVMFFVG 131
            .|:...||:|::   ||.:  :.|......|:|||..|.:..:|....:.....|.:|.:.||..
 Frog    71 EWLTLGLNMPLLAYHIWRY--MSRPVMSGPGLYDPTTIMNADILAYCQKEGWCKLAFYLLSFFYY 133

  Fly   132 LYCLISSLI 140
            ||.:|..|:
 Frog   134 LYGMIYVLV 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cnirNP_608745.1 Cornichon 8..133 CDD:460883 37/129 (29%)
cnih1NP_001008067.1 Cornichon 7..135 CDD:460883 37/129 (29%)

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