DRSC/TRiP Functional Genomics Resources

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Protein Alignment HTR1D and AdoR

DIOPT Version :10

Sequence 1:NP_000855.1 Gene:HTR1D / 3352 HGNCID:5289 Length:377 Species:Homo sapiens
Sequence 2:NP_651772.1 Gene:AdoR / 43583 FlyBaseID:FBgn0039747 Length:774 Species:Drosophila melanogaster


Alignment Length:374 Identity:103/374 - (27%)
Similarity:168/374 - (44%) Gaps:46/374 - (12%)


- Green bases have known domain annotations that are detailed below.


Human     7 SAEG--LPQEASNRSLNATETSEAWDPRTLQALKISLAVVLSVITLATVLSNAFVLTTILLTRKL 69
            |.||  ||..|:..|.:|.::.   .|.:  .|.|...|...::.:.:::.|..|:......|||
  Fly    13 SFEGPLLPLHAATTSKDAKDSD---SPSS--ELNIPYTVFEVLVAIVSIIGNVLVIIVFRRERKL 72

Human    70 HTPANYLIGSLATTDLLVSILVMPISIAYTITHTWNFGQILCDIWLSSDITCCTASILHLCVIAL 134
            ....||.|.|||..||||..|.:|.:|..::....|..  .|...:|..:..||.||..|..:::
  Fly    73 RRRTNYYIVSLAMADLLVGALGIPFAILASMGLPRNLH--ACLFTVSLLVVLCTISIFCLVAVSV 135

Human   135 DRYWAITDALEYSKRRTAGHAATMIAIVWAISICISIPPLFWRQAKAQEEMSDCLVNTSQISYTI 199
            ||||||...:.||:......|..:|::.|.....:...|||...|..........|.....:|.:
  Fly   136 DRYWAILYPMAYSRNVRTRTAIFIISMCWVAGTIVGFLPLFGWHADVNHNQECLFVEVMDYNYLV 200

Human   200 YSTCGAFYIPSVLLIILYGRIYRAARNRI-----LNPPSLYGKRFTTAHLITGSAGSSLCSLNSS 259
            :........|::|::..|..|||....::     :||.|...:|.:.|.:...:.|..       
  Fly   201 FLYFATIITPALLMLAFYTHIYRVIIKQVRQIVTMNPASDLSRRSSAAVVQVTTPGRG------- 258

Human   260 LHEGHSHSAGSPLFFNHVKIKLADSALERKRISAARER--KATKILGIILGAFIICWLPFFVVSL 322
               ||:   |:.|                :.:.|||:|  |||:.|.||:..|:|||:|.:.::.
  Fly   259 ---GHT---GTML----------------RVLGAARKRDVKATQNLSIIVLFFMICWIPLYTINC 301

Human   323 VLPICRDSCWIHPALFDFFTWLGYLNSLINPIIYTVFNEEFRQAFQKIV 371
            :...|.| |::||.|..|...|.:|||.:||::|....::||.|.:.::
  Fly   302 IKAFCPD-CYVHPKLTLFCIILSHLNSAVNPVLYAYHLKDFRAALKNLL 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HTR1DNP_000855.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 7/17 (41%)
7tmA_5-HT1B_1D 35..367 CDD:320455 93/338 (28%)
TM helix 1 40..66 CDD:320455 3/25 (12%)
TM helix 2 73..99 CDD:320455 13/25 (52%)
TM helix 3 111..141 CDD:320455 12/29 (41%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250|UniProtKB:P41595 135..137 1/1 (100%)
TM helix 4 153..176 CDD:320455 5/22 (23%)
TM helix 5 194..223 CDD:320455 6/28 (21%)
TM helix 6 294..324 CDD:320455 14/31 (45%)
TM helix 7 335..360 CDD:320455 10/24 (42%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 352..356 2/3 (67%)
AdoRNP_651772.1 7tmA_Adenosine_R 42..345 CDD:341316 92/334 (28%)
TM helix 1 43..69 CDD:341316 3/25 (12%)
TM helix 2 76..103 CDD:341316 13/26 (50%)
TM helix 3 112..142 CDD:341316 12/29 (41%)
TM helix 4 156..174 CDD:341316 3/17 (18%)
TM helix 5 196..225 CDD:341316 7/28 (25%)
TM helix 6 273..303 CDD:341316 12/29 (41%)
TM helix 7 313..338 CDD:341316 10/24 (42%)

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