DRSC/TRiP Functional Genomics Resources

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Protein Alignment HTR1D and TyrR

DIOPT Version :10

Sequence 1:NP_000855.1 Gene:HTR1D / 3352 HGNCID:5289 Length:377 Species:Homo sapiens
Sequence 2:NP_650652.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster


Alignment Length:519 Identity:139/519 - (26%)
Similarity:202/519 - (38%) Gaps:171/519 - (32%)


- Green bases have known domain annotations that are detailed below.


Human    17 NRSLNATETSEAWDPRTLQALKISLAVVLSVITLATVLSNAFVLTTILLTRKLHTPANYLIGSLA 81
            |.|..|.|.:..:| ..|....|.|..|.:...:.||:.|..|:..||.||:|.|..|..:.|||
  Fly    96 NESAAAAEWAHFYD-LVLSWQGIILIAVFATFIVVTVIGNTLVILAILTTRRLRTITNCFVMSLA 159

Human    82 TTDLLVSILVMPISIAYTITHTWNFGQILCDIWLSSDITCCTASILHLCVIALDRYWAITDALEY 146
            ..||||.|.|||.::|..:..:|..|.:|||||:|.|:..||||||.||.|::|||.|:|..|.|
  Fly   160 VADLLVGIFVMPPAVAVHLIGSWQLGWVLCDIWISLDVLLCTASILSLCAISVDRYLAVTRPLTY 224

Human   147 S-KRRTAGHAATMIAIVWAISICISIPPLFWRQAKAQEEMSDCLVNTSQISYTIYSTCGAFYIPS 210
            | |||:...|..||.|||.:::.|:.||:.......:.::.:|..|.:: .|.|:|..|:|:||.
  Fly   225 SRKRRSKRLALIMILIVWLLALAITCPPMLGWYEPGRRDLRECRYNQNE-GYVIFSAMGSFFIPM 288

Human   211 VLLIILYGRI--YRAARNRILNPPSLYG---KRFTTAH--------------------------- 243
            .::|.:|.||  ..|:|:..:...|::.   ||:|.|.                           
  Fly   289 AVMIYVYARISCVIASRHDNMTDISVHNKKFKRYTAADVENELSEQEQHSSVGQRQRQATSRTFS 353

Human   244 ------------------------------------------------LITGSAGSSL-CSLN-- 257
                                                            |.:|..|.|: |:.|  
  Fly   354 NQTIAKELQDMMLSDSDNCAAMGAGGAGGGGGGASSATGGTHCQSLLALPSGGVGGSMGCAKNGC 418

Human   258 -----------------------------SSL--------------------------------- 260
                                         |||                                 
  Fly   419 YELTRPSSLKRASTASTTITTMTSGMGPGSSLLDAQWQSQPPGQTGQVQTHSLSQPPRTHSFRHS 483

Human   261 --------------HEGHSHSAG--SPLFFNHVKIKLADSALERKRISAARERKATKILGIILGA 309
                          |..:.|.||  :.....:........:|..:..|..:|.|.|:.|.|::|.
  Fly   484 HGERDRERLRSHHHHPHYHHQAGVTTTSTSGNTSANTNSKSLSNRITSLKKENKTTQTLSIVVGG 548

Human   310 FIICWLPFFVVSLVLPICRDSCWIHPA---LFDFFTWLGYLNSLINPIIYTVFNEEFRQAFQKI 370
            ||.||||||:..|:.|...:    |.|   |....||||:.||.|||.||..::.:||.||.::
  Fly   549 FIACWLPFFINYLITPFLAE----HQASQMLAKALTWLGWFNSAINPFIYAFYSVDFRAAFWRL 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HTR1DNP_000855.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 2/5 (40%)
7tmA_5-HT1B_1D 35..367 CDD:320455 131/496 (26%)
TM helix 1 40..66 CDD:320455 8/25 (32%)
TM helix 2 73..99 CDD:320455 13/25 (52%)
TM helix 3 111..141 CDD:320455 19/29 (66%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250|UniProtKB:P41595 135..137 1/1 (100%)
TM helix 4 153..176 CDD:320455 9/22 (41%)
TM helix 5 194..223 CDD:320455 11/30 (37%)
TM helix 6 294..324 CDD:320455 15/29 (52%)
TM helix 7 335..360 CDD:320455 13/27 (48%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 352..356 2/3 (67%)
TyrRNP_650652.1 7tmA_tyramine_R-like 118..>304 CDD:320189 76/186 (41%)
TM helix 1 118..144 CDD:320189 8/25 (32%)
TM helix 2 151..177 CDD:320189 13/25 (52%)
TM helix 3 189..219 CDD:320189 19/29 (66%)
TM helix 4 232..255 CDD:320189 9/22 (41%)
TM helix 5 272..297 CDD:320189 9/25 (36%)
7tm_GPCRs <533..605 CDD:475119 32/75 (43%)
TM helix 6 539..561 CDD:320189 12/21 (57%)
TM helix 7 573..598 CDD:320189 12/24 (50%)

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