DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerRS and SARS2

DIOPT Version :9

Sequence 1:NP_001259982.1 Gene:SerRS / 33518 FlyBaseID:FBgn0031497 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001139373.1 Gene:SARS2 / 54938 HGNCID:17697 Length:520 Species:Homo sapiens


Alignment Length:478 Identity:132/478 - (27%)
Similarity:219/478 - (45%) Gaps:98/478 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 SEDLPADVT--KDLTEI-------------VAETLQPLTVNQ----IKQLRV------------- 110
            |.||||.::  ::|.::             |.|.::.|..||    ::|:|:             
Human    83 SADLPAIISTWQELRQLQEQIRSLEEEKAAVTEAVRALLANQDSGEVQQVRLDPGAGSIFGPTFL 147

  Fly   111 -------LIDDAMTENQ---KSLELAEQTRNTSLREVGNHLHESVPVSNDEDENRVERTFGD--- 162
                   |:.:|..|.|   ::|:|..||            |..||| .||.:.||....||   
Human   148 PFPGQLSLLVEAQLEEQFYLQALKLPNQT------------HPDVPV-GDESQARVLHMVGDKPV 199

  Fly   163 --CEKRGKYSHVDLIVMIDGMNAEKGAVVSGGRGYFLTGAAVFLEQALIQHALHLLYARDYVPLY 225
              .:.||   |:::...:|.:..::.:.|||.|.|:|.||...|:..|:....:.|..|.:.|:.
Human   200 FSFQPRG---HLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPMT 261

  Fly   226 TPFFMRKEVMQ--------EVAQLSQFDEELYKVVGKGSEKAEEVGIDEKYLIATSEQPIAAYHR 282
            .|..:|..|.:        ..:|:...|...:|               :..|..|:|..:|.|..
Human   262 VPDLLRGAVFEGCGMTPNANPSQIYNIDPARFK---------------DLNLAGTAEVGLAGYFM 311

  Fly   283 DEWLPESSLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNKSWEMMDEMIG 347
            |..:....||::....|||:|.|..: |::.||::|||.|.|||.|.:|.|...:|.::::|.:.
Human   312 DHTVAFRDLPVRMVCSSTCYRAETNT-GQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLS 375

  Fly   348 NAEQFCQSLGIPYRVVNIVSGALNHAASKKLDLEAWFGGSGAYRELVSCSNCLDYQARRLLVRFG 412
            ...:....||:.:||:::.:..|...|.:|.|:|||..|.|.:.|:.|.|||.|:|:|||.:.| 
Human   376 LQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMF- 439

  Fly   413 QTKKMNAAVDYVHMLNATMCAATRVICAILETHQTETG-IKVPEPLKKYMPAKFQDEIPFVKPAP 476
            ||:.  ..:.:.|.:|||.||..|::.|:||::|.:.| :.||..|:.|:..   |.|    .||
Human   440 QTEA--GELQFAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQSYLGT---DRI----TAP 495

  Fly   477 IDLELAAAEKQKGKKEKTKKDPA 499
            ..:.|......:.:|......||
Human   496 THVPLQYIGPNQPRKPGLPGQPA 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerRSNP_001259982.1 PLN02678 3..476 CDD:215364 126/453 (28%)
Seryl_tRNA_N 3..111 CDD:280549 13/71 (18%)
SerRS_core 153..461 CDD:238393 96/321 (30%)
SARS2NP_001139373.1 PRK05431 58..495 CDD:235461 126/453 (28%)
SerRS_core 187..487 CDD:238393 96/321 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0172
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S479
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D495094at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100275
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.670

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