DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerRS and sars-1

DIOPT Version :9

Sequence 1:NP_001259982.1 Gene:SerRS / 33518 FlyBaseID:FBgn0031497 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001379106.1 Gene:sars-1 / 177859 WormBaseID:WBGene00005663 Length:487 Species:Caenorhabditis elegans


Alignment Length:491 Identity:316/491 - (64%)
Similarity:385/491 - (78%) Gaps:4/491 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVLDLDLFRSDKGGNPDLVRENQKKRFKDVALVETVIAKDTEWRQCRHRADNLNKVKNVCSKVIG 65
            ||||:|:||::|||||:::|::|:.||||..||:.||..|.:||:.|..||.||:.||..||.||
 Worm     1 MVLDIDMFRTEKGGNPEIIRKSQQDRFKDPKLVDEVIELDEKWRKERFVADQLNRQKNAISKAIG 65

  Fly    66 EKMKKKEPVGAMSEDLPADVTKDLTEIVAETLQPLTVNQIKQLRVLIDDAMTENQKSLELAEQTR 130
            ||||||||.|. .:.:..|:...|.|:..:.|..|||.|:|:||||:|:...:...::...|..|
 Worm    66 EKMKKKEPQGT-DDSVADDIVARLAELKIDELSQLTVVQLKKLRVLVDEKSVQTAAAVIANENAR 129

  Fly   131 NTSLREVGNHLHESVPVSNDEDENRVERTFGDCEKRGKYSHVDLIVMIDGMNAEKGAVVSGGRGY 195
            :..|.::||.:|.||.||.||..|::||||||...:.|||||||:||:||.:.|:|.||:|||||
 Worm   130 HEKLIQIGNLIHSSVVVSKDEANNKIERTFGDLSTKKKYSHVDLVVMVDGFDGERGTVVAGGRGY 194

  Fly   196 FLTGAAVFLEQALIQHALHLLYARDYVPLYTPFFMRKEVMQEVAQLSQFDEELYKVVGKGSEKAE 260
            ||.|..||||||:||.||..|..:.|||||||||||||||||||||||||:|||||..||||.|.
 Worm   195 FLKGPLVFLEQAIIQLALQRLNVKGYVPLYTPFFMRKEVMQEVAQLSQFDDELYKVSSKGSEIAG 259

  Fly   261 EVGIDEKYLIATSEQPIAAYHRDEWLPESSLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKV 325
            :..:||||||||||||||||||:||:.|:.|||||||:||||||||||||||||||||||||||:
 Worm   260 DTSVDEKYLIATSEQPIAAYHRNEWIKETELPIKYAGVSTCFRQEVGSHGRDTRGIFRVHQFEKI 324

  Fly   326 EQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIVSGALNHAASKKLDLEAWFGGSGAY 390
            |||||.||:||:||.:.||||||||.:.|.|.|||:|||||||.||:||:||.||||||.|||||
 Worm   325 EQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPYQVVNIVSGELNNAAAKKFDLEAWFPGSGAY 389

  Fly   391 RELVSCSNCLDYQARRLLVRFGQTKKMNAAVDYVHMLNATMCAATRVICAILETHQTETGIKVPE 455
            |||||||||||||:|||.||:|||||::..|.:||||||||||.|||||||||.:|||.||.||.
 Worm   390 RELVSCSNCLDYQSRRLKVRYGQTKKLSGEVPFVHMLNATMCATTRVICAILENNQTEEGINVPT 454

  Fly   456 PLKKYMPAKFQDEIPFVKPAPIDLELAAAEKQKGKK 491
            .::::||..::..||||||||||.:   |:|..|||
 Worm   455 AIQQWMPENYRTFIPFVKPAPIDED---AKKATGKK 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerRSNP_001259982.1 PLN02678 3..476 CDD:215364 305/472 (65%)
Seryl_tRNA_N 3..111 CDD:280549 54/107 (50%)
SerRS_core 153..461 CDD:238393 228/307 (74%)
sars-1NP_001379106.1 PLN02678 3..486 CDD:215364 311/486 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161000
Domainoid 1 1.000 306 1.000 Domainoid score I740
eggNOG 1 0.900 - - E1_COG0172
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4751
Inparanoid 1 1.050 638 1.000 Inparanoid score I450
Isobase 1 0.950 - 0 Normalized mean entropy S479
OMA 1 1.010 - - QHG60616
OrthoDB 1 1.010 - - D495094at33208
OrthoFinder 1 1.000 - - FOG0004314
OrthoInspector 1 1.000 - - oto19437
orthoMCL 1 0.900 - - OOG6_100275
Panther 1 1.100 - - LDO PTHR11778
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5591
SonicParanoid 1 1.000 - - X3050
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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