DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and PFA4

DIOPT Version :10

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_014640.1 Gene:PFA4 / 854159 SGDID:S000005363 Length:378 Species:Saccharomyces cerevisiae


Alignment Length:55 Identity:21/55 - (38%)
Similarity:26/55 - (47%) Gaps:7/55 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 NICEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCIGERNY-------VWYIV 313
            |.|:.|:...|.|::||..|..||...|||..|...|:|..||       .|.||
Yeast    78 NFCKKCQSYKPERSHHCKTCNQCVLMMDHHCPWTMNCVGFANYPHFLRFLFWIIV 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 DHHC 262..399 CDD:396215 21/55 (38%)
PFA4NP_014640.1 COG5273 1..344 CDD:227598 21/55 (38%)

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