DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and PFA5

DIOPT Version :9

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_010747.1 Gene:PFA5 / 852070 SGDID:S000002867 Length:374 Species:Saccharomyces cerevisiae


Alignment Length:73 Identity:23/73 - (31%)
Similarity:32/73 - (43%) Gaps:4/73 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 HGQPNICEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCIGERNYVWYIVGLALSEIALLLGA 326
            ||.|..|..|:.:...|.:|....|.|:.|.||:..|:...||..||..::...|.....||   
Yeast   125 HGYPIWCSECQSLKMERTHHSSELGHCIPRFDHYCMWIGTVIGRDNYRLFVQFAAYFSTLLL--- 186

  Fly   327 NLTLTSIC 334
             :...|||
Yeast   187 -IMWVSIC 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 zf-DHHC 262..399 CDD:279823 23/73 (32%)
PFA5NP_010747.1 COG5273 9..335 CDD:227598 23/73 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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